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Rose Ruiz Daniels

Applying genetic technologies to combat infectious diseases in aquaculture
2022 · Nicholas A. Robinson, Diego Robledo, et al. · Reviews in Aquaculture · 80
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Organized B cell sites in cartilaginous fishes reveal the evolutionary foundation of germinal centers
2023 · Hanover Matz, Richard S. Taylor, et al. · Cell Reports · 45
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Single cell transcriptomics of Atlantic salmon (Salmo salar L.) liver reveals cellular heterogeneity and immunological responses to challenge by Aeromonas salmonicida
2022 · Richard S Taylor, Rose Ruiz Daniels, et al. · Frontiers in Immunology · 44
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Assessing vulnerability of two Mediterranean conifers to support genetic conservation management in the face of climate change
2017 · María Jesús Serra‐Varela, Ricardo Alía, et al. · Diversity and Distributions · 41
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Single cell genomics as a transformative approach for aquaculture research and innovation
2023 · Rose Ruiz Daniels, Richard S. Taylor, et al. · Reviews in Aquaculture · 38
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Mapping the cellular landscape of Atlantic salmon head kidney by single cell and single nucleus transcriptomics
2024 · Adriana M.S. Andresen, Richard S. Taylor, et al. · Fish & Shellfish Immunology · 27
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Inferring selection in instances of long‐range colonization: The Aleppo pine (Pinus halepensis) in the Mediterranean Basin
2018 · Rose Ruiz Daniels, Richard S. Taylor, et al. · Molecular Ecology · 24
Cell atlas of the Atlantic salmon spleen reveals immune cell heterogeneity and cell-specific responses to bacterial infection
2024 · Jianxuan Sun, Rose Ruiz Daniels, et al. · Fish & Shellfish Immunology · 21
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Common microgeographical selection patterns revealed in four European conifers
2022 · Ivan Scotti, Hadrien Lalagüe, et al. · Molecular Ecology · 21
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Genomic Epidemiology of Salmonid Alphavirus in Norwegian Aquaculture Reveals Recent Subtype-2 Transmission Dynamics and Novel Subtype-3 Lineages
2021 · Daniel J. Macqueen, Oliver Eve, et al. · Viruses · 19
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Do parasites adopt different strategies in different intermediate hosts? Host size, not host species, influencesCoitocaecum parvum(Trematoda) life history strategy, size and egg production
2012 · R. RUIZ DANIELS, S. BELTRAN, et al. · Parasitology · 19
A versatile nuclei extraction protocol for single nucleus sequencing in non-model species–Optimization in various Atlantic salmon tissues
2023 · Rose Ruiz Daniels, Richard S. Taylor, et al. · PLoS ONE · 17
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Looking for Local Adaptation: Convergent Microevolution in Aleppo Pine (Pinus halepensis)
2019 · Rose Ruiz Daniels, Richard S. Taylor, et al. · Genes · 17
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Keratinocytes drive the epithelial hyperplasia key to sea lice resistance in coho salmon
2024 · S. J. Salisbury, R. Ruiz Daniels, et al. · BMC Biology · 13
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Transcriptomic landscape of Atlantic salmon ( Salmo salar L.) skin
2023 · Lene R Sveen, Nicholas Robinson, et al. · G3 Genes Genomes Genetics · 13
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Generation of a Litopenaeus vannamei hepatopancreas cell atlas from single nuclei transcriptomics using a new nuclei isolation method
2025 · Alexandra Florea, Rose Ruiz Daniels, et al. · BMC Genomics · 7
Cell Type Resolved Expression of Duplicate Genes Retained From Whole Genome Duplication in Atlantic salmon
2025 · Richard S Taylor, Rose Ruiz Daniels, et al. · Genome Biology and Evolution · 7
Local inflammation at the salmon louse (Lepeophtheirus salmonis) attachment site contributes to copepodid rejection in coho salmon (Oncorhynchus kisutch)
2025 · Lene Sveen, Mark D. Fast, et al. · Cell and Tissue Research · 6
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Evolution of ray-finned fish genomes: Status and directions with a primer on microRNA characterization
2022 · Richard S. Taylor, Rose Ruiz Daniels, et al. · Elsevier eBooks · 5
Transcriptomic characterization of transitioning cell types in the skin of Atlantic salmon
2025 · R. Ruiz Daniels, S. J. Salisbury, et al. · BMC Biology · 3
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Salmonids reveal principles of regulatory evolution following autotetraploidization
2025 · Marie-Odile Baudement, Diego Perojil Morata, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2
Developmental contexts of gene-regulatory evolution following whole genome duplication in salmonids
2026 · Marie-Odile Baudement, Diego Perojil Morata, et al. · Nature Ecology & Evolution · 1
Impaired Sertoli-Spermatogonia interactions contribute to oligospermia and infertility in F1 captive-bred male Solea senegalensis
2025 · Guillermo Barturen, Diego Robledo, et al. · Aquaculture · 1
Characterisation of mesenchymal stromal cells in the skin of Atlantic salmon
2024 · R. Ruiz Daniels, S.J. Salisbury, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 1
Organized B cell selection sites in cartilaginous fishes reveal the evolutionary foundation of germinal center-based selection
2023 · Hanover Matz, Richard S. Taylor, et al. · Developmental & Comparative Immunology · 1
Works count: 47
Citation count: 471
H-index: 13
I10-index: 15
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