Author

Alexandre Bouchard‐Côté

Observed names: A. Bouchard-Cote, A. Bouchard-Côté, Alexandre Bouchard-C t, Alexandre Bouchard-C\, Alexandre Bouchard-Cote, Alexandre Bouchard-Côté, Alexandre Bouchard-cote, Alexandre Bouchard-côté, Bouchard-C\^ot\'e, Alexandre, Bouchard-Cote, Alexandre, Bouchard-CÃ´tÃ©, Alexandre, Bouchard-Côté Alexandre, Bouchard-Côté, Alexandre

Institution: University of British Columbia

Observed institutions: University of British Columbia, University of Waterloo, Simon Fraser University, McGill University, University of California, Berkeley

ORCID: 0000-0001-7402-8506

Observed ORCID: 0000-0001-7402-8506

OpenAlex ID: A5003426513

PyClone: statistical inference of clonal population structure in cancer

2014 · Andrew Roth, Jaswinder Khattra, et al. · Nature Methods · 999

Interfaces of Malignant and Immunologic Clonal Dynamics in Ovarian Cancer

2018 · Allen W. Zhang, Andrew McPherson, et al. · Cell · 355

Divergent modes of clonal spread and intraperitoneal mixing in high-grade serous ovarian cancer

2016 · Andrew McPherson, Andrew Roth, et al. · Nature Genetics · 340

An end-to-end discriminative approach to machine translation

2006 · Percy Liang, Alexandre Bouchard-Côté, et al. · 258

Painless Unsupervised Learning with Features

2010 · Taylor Berg-Kirkpatrick, Alexandre Bouchard‐Côté, et al. · 213

Clonal fitness inferred from time-series modelling of single-cell cancer genomes

2021 · Sohrab Salehi, Farhia Kabeer, et al. · Nature · 152

Automated reconstruction of ancient languages using probabilistic models of sound change

2013 · Alexandre Bouchard-Côté, David Hall, et al. · Proceedings of the National Academy of Sciences · 133

clonealign: statistical integration of independent single-cell RNA and DNA sequencing data from human cancers

2019 · Kieran R Campbell, Adi Steif, et al. · Genome biology · 119

Clonal genotype and population structure inference from single-cell tumor sequencing

2016 · Andrew Roth, Andrew McPherson, et al. · Nature Methods · 112

Sampling alignment structure under a Bayesian translation model

2008 · John DeNero, Alexandre Bouchard-Côté, et al. · Conference on Empirical Methods in Natural Language Processing (EMNLP) · 96

Phylogenetic Inference via Sequential Monte Carlo

2012 · Alexandre Bouchard-Côté, Sriram Sankararaman, et al. · Systematic Biology · 90

Non-Reversible Parallel Tempering: A Scalable Highly Parallel MCMC Scheme

2021 · Saifuddin Syed, Alexandre Bouchard-Côté, et al. · Journal of the Royal Statistical Society Series B (Statistical Methodology) · 68

Piecewise-Deterministic Markov Chain Monte Carlo

2017 · Vanetti, Paul, Bouchard-Côté, Alexandre, et al. · arXiv (Cornell University) · 68

ddClone: joint statistical inference of clonal populations from single cell and bulk tumour sequencing data

2017 · Sohrab Salehi, Adi Steif, et al. · Genome biology · 58

Piecewise deterministic Markov processes for scalable Monte Carlo on restricted domains

2018 · Joris Bierkens, Alexandre Bouchard-Côté, et al. · Statistics & Probability Letters · 51

Evolutionary inference via the Poisson Indel Process

2012 · Alexandre Bouchard-Côté, Michael I. Jordan · Proceedings of the National Academy of Sciences · 51

An Entropy Search Portfolio for Bayesian Optimization

2014 · Shahriari, Bobak, Wang, Ziyu, et al. · arXiv (Cornell University) · 40

Randomized Hamiltonian Monte Carlo as scaling limit of the bouncy particle sampler and dimension-free convergence rates

2021 · George Deligiannidis, Daniel Paulin, et al. · The Annals of Applied Probability · 39

Unbounded Bayesian Optimization via Regularization

2015 · Shahriari, Bobak, Bouchard-Côté, Alexandre, et al. · arXiv (Cornell University) · 38

Improved reconstruction of protolanguage word forms

2009 · Alexandre Bouchard-Côté, Thomas L. Griffiths, et al. · 38

Cancer phylogenetic tree inference at scale from 1000s of single cell genomes

2023 · Sohrab Salehi, Fatemeh Dorri, et al. · Peer Community Journal · 37

ReMixT: clone-specific genomic structure estimation in cancer

2017 · Andrew W. McPherson, Andrew Roth, et al. · Genome biology · 37

The Bouncy Particle Sampler: A Nonreversible Rejection-Free Markov Chain Monte Carlo Method

2017 · Alexandre Bouchard-Côté, Sebastian J. Vollmer, et al. · Journal of the American Statistical Association · 37

Exponential ergodicity of the bouncy particle sampler

2019 · George Deligiannidis, Alexandre Bouchard-Côté, et al. · The Annals of Statistics · 36

An Annealed Sequential Monte Carlo Method for Bayesian Phylogenetics

2019 · Liangliang Wang, Shijia Wang, et al. · Systematic Biology · 33

Works count: 132

Citation count: 3,879

H-index: 28

I10-index: 38