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Sonia C. Timberlake

Population Genomics of Early Events in the Ecological Differentiation of Bacteria
2012 · B. Jesse Shapiro, Jonathan Friedman, et al. · Science · 569
Fecal Microbiota Transplantation in Patients With Primary Sclerosing Cholangitis: A Pilot Clinical Trial
2019 · Jessica R. Allegretti, Zain Kassam, et al. · The American Journal of Gastroenterology · 238
Unlocking Short Read Sequencing for Metagenomics
2010 · Sébastien Rodrigue, Arne C. Materna, et al. · PLoS ONE · 177
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Adaptive radiation by waves of gene transfer leads to fine-scale resource partitioning in marine microbes
2016 · Jan-Hendrik Hehemann, Philip Arevalo, et al. · Nature Communications · 170
DNA phosphorothioation is widespread and quantized in bacterial genomes
2011 · Lianrong Wang, Shi Chen, et al. · Proceedings of the National Academy of Sciences · 165
Hierarchical Clustering Can Identify B Cell Clones with High Confidence in Ig Repertoire Sequencing Data
2017 · Namita T Gupta, Kristofor D Adams, et al. · The Journal of Immunology · 161
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Acute neuroprotective synergy of erythropoietin and insulin-like growth factor I
2004 · Murat Digicaylioglu, Gwenn Garden, et al. · Proceedings of the National Academy of Sciences · 115
Fecal Microbiota Transplantation Capsules with Targeted Colonic Versus Gastric Delivery in Recurrent Clostridium difficile Infection: A Comparative Cohort Analysis of High and Lose Dose
2018 · Jessica R. Allegretti, Monika Fischer, et al. · Digestive Diseases and Sciences · 69
Merging Taxonomy with Ecological Population Prediction in a Case Study of Vibrionaceae
2011 · Sarah P. Preheim, Sonia Timberlake, et al. · Applied and Environmental Microbiology · 59
Exploration of immunoglobulin transcriptomes from mice immunized with three-finger toxins and phospholipases A 2 from the Central American coral snake, Micrurus nigrocinctus
2017 · Andreas H Laustsen, Mikael Engmark, et al. · PeerJ · 41
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742 - A Double-Blind, Randomized, Placebo-Controlled Trial of Fecal Microbiota Transplantation Capsules (FMTC) for the Treatment of Diarrhea-Predominant Irritable Bowel Syndrome (IBS-D)
2018 · Olga C. Aroniadis, Lawrence J. Brandt, et al. · Gastroenterology · 29
Tumor-infiltrating immune repertoires captured by single-cell barcoding in emulsion
2017 · Adrian W. Briggs, Stephen J. Goldfless, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 27
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A Mobile Element in mutS Drives Hypermutation in a Marine Vibrio
2017 · Nathaniel D. Chu, Sean A. Clarke, et al. · mBio · 26
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Microbiome predictors of dysbiosis and VRE decolonization in patients with recurrent C. difficile infections in a multi-center retrospective study
2019 · Marina Santiago, 1 Finch Therapeutics, 200 Inner Belt Rd, Somerville, MA 02143, USA, et al. · AIMS Microbiology · 19
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Beyond Fecal Microbiota Transplantation: Developing Drugs from the Microbiome
2020 · Ylaine Gerardin, Sonia Timberlake, et al. · The Journal of Infectious Diseases · 17
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Depletion of key gut bacteria predicts disrupted bile acid metabolism in inflammatory bowel disease
2024 · Daniel Peterson, Christopher Weidenmaier, et al. · Microbiology Spectrum · 10
Fecal Microbiota Transplantation Improves Microbiome Diversity and Liver Enzyme Profile in Primary Sclerosing Cholangitis
2017 · Jessica R. Allegretti, Zain Kassam, et al. · The American Journal of Gastroenterology · 5
Correction to: Fecal Microbiota Transplantation Capsules with Targeted Colonic Versus Gastric Delivery in Recurrent Clostridium difficile Infection: A Comparative Cohort Analysis of High and Low Dose
2019 · Jessica R. Allegretti, Monika Fischer, et al. · Digestive Diseases and Sciences · 3
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Tu1511 - Microbial Engraftment Correlates with a Decrease in Alkaline Phosphatase (Alp) after Fecal Microbiota Transplantation from a Rationally-Selected Donor in Primary Sclerosing Cholangitis
2018 · Jessica R. Allegretti, Zain Kassam, et al. · Gastroenterology · 2
Bile Acid Profiles are Not Altered by Fecal Microbiota Transplantation for the Treatment of Primary Sclerosing Cholangitis: Category Award (Liver): Presidential Poster Award
2018 · Jessica R. Allegretti, Benjamin Mullish, et al. · The American Journal of Gastroenterology · 1
Tu1891 - Fecal Microbiota Transplantation Capsules with Targerted Colonic Versus Gastric Delivery in Recurrent C. Difficile Infection: A Comparative Cohort Analysis of High and Low Doses
2018 · Jessica R. Allegretti, Monika Fischer, et al. · Gastroenterology · 1
Abstract 2727: A designed live bacterial therapeutic restores responder-like microbiome profiles and improves immune checkpoint inhibitor (ICI) response in a predictive model.
2026 · Glen J. Weiss, Sonia Timberlake, et al. · Cancer Research
Abstract 1442: Comprehensive TIL profiling by simultaneous DNA barcoding of proteins, RNA and natively paired immune receptors from millions of single cells
2016 · Katherine L. Connor, Adrian W. Briggs, et al. · Cancer Research
Abstract 3998: Sequencing the B-cell and T-cell repertoire
2016 · Fiona J. Stewart, Mehmet Karaca, et al. · Cancer Research
Abstract 643: Identification of novel pancreatic cancer-specific antibodies and their target antigens through a next generation immune sequencing platform
2015 · David A. Fabrizio, Sonia Timberlake, et al. · Cancer Research
Works count: 31
Citation count: 1,904
H-index: 15
I10-index: 16
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