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Vlastimil Martinek
Observed name:
Martinek, Vlastimil
Institution:
University of Malta
Observed institutions:
National Institutes of Health,
Central European Institute of Technology,
University of Malta,
Masaryk University,
Central European Institute of Technology – Masaryk University,
National Institute on Aging
show all 6
ORCID:
0000-0002-3204-1830
Observed ORCID:
0000-0002-3204-1830
OpenAlex ID:
A5006737958
Genomic benchmarks: a collection of datasets for genomic sequence classification
2023
·
Katarina Gresova
, Vlastimil Martinek
, et al.
·
BMC Genomic Data
·
87
PDF
Full-length direct RNA sequencing uncovers stress granule-dependent RNA decay upon cellular stress
2024
·
Showkat A. Dar
, Sulochan Malla
, et al.
·
eLife
·
17
Agentomics: an agentic system that autonomously develops novel state-of-the-art solutions for biomedical machine learning tasks
2026
·
Vlastimil Martinek
, Andrea Gariboldi
, et al.
·
Bioinformatics
·
10
Fine-Tuning Transformers For Genomic Tasks
2022
·
Vlastimil Martinek
, David Cechak
, et al.
·
bioRxiv (Cold Spring Harbor Laboratory)
·
9
PDF
Deep learning and direct sequencing of labeled RNA captures transcriptome dynamics
2024
·
Vlastimil Martinek
, Jessica Martin
, et al.
·
NAR Genomics and Bioinformatics
·
8
Agentomics-ML: Autonomous Machine Learning Experimentation Agent for Genomic and Transcriptomic Data
2025
·
Martinek, Vlastimil
, Gariboldi, Andrea
, et al.
·
arXiv (Cornell University)
·
6
PDF
Calc-X and Calcformers: Empowering Arithmetical Chain-of-Thought through Interaction with Symbolic Systems
2023
·
Marek Kadlčík
, Michal Štefánik
, et al.
·
Conference on Empirical Methods in Natural Language Processing (EMNLP)
·
6
PDF
Full-length direct RNA sequencing uncovers stress-granule dependent RNA decay upon cellular stress
2024
·
Showkat A. Dar
, Sulochan Malla
, et al.
·
eLife
·
3
PDF
RBP-Tar – a searchable database for experimental RBP binding sites
2024
·
Katarina Gresova
, Tomas Racek
, et al.
·
F1000Research
·
2
Full-length direct RNA sequencing uncovers stress-granule dependent RNA decay upon cellular stress
2024
·
Showkat A Dar
, Sulochan Malla
, et al.
·
eLife
·
2
RBP-Tar – a searchable database for experimental RBP binding sites
2023
·
Katarina Gresova
, Tomas Racek
, et al.
·
F1000Research
·
1
PDF
Author response: Full-length direct RNA sequencing uncovers stress granule-dependent RNA decay upon cellular stress
2024
·
Showkat Ahmad Dar
, Sulochan Malla
, et al.
·
eLife
Author response: Full-length direct RNA sequencing uncovers stress-granule dependent RNA decay upon cellular stress
2024
·
Showkat A Dar
, Sulochan Malla
, et al.
·
eLife
RBP-Tar – a searchable database for experimental RBP binding sites
2024
·
Katarina Gresova
, Tomas Racek
, et al.
·
F1000Research
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Works count:
16
Citation count:
151
H-index:
6
I10-index:
3
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