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Adolfo B. Poma
Observed names:
A. B. Poma,
A.B. Poma,
Adolfo B Poma,
Adolfo Poma,
Adolfo Poma Bernaola,
Poma, Adolfo,
Poma, Adolfo B,
Poma, Adolfo B.
show all 8
Institutions:
Institute of Fundamental Technological Research,
Polish Academy of Sciences
Observed institutions:
Max Planck Society,
Lodz University of Technology,
Sorbonne Université,
Institute of Physics,
Max Planck Institute for Polymer Research,
Institute of Fundamental Technological Research,
Sapienza University of Rome,
Polish Academy of Sciences
show all 8
ORCID:
0000-0002-8875-3220
Observed ORCID:
0000-0002-8875-3220
OpenAlex ID:
A5006747824
Works
68
Awards
1
Novel 2019 coronavirus structure, mechanism of action, antiviral drug promises and rule out against its treatment
2020
·
Subramanian Boopathi
, Adolfo B. Poma
, et al.
·
Journal of Biomolecular Structure and Dynamics
·
550
Combining the MARTINI and Structure-Based Coarse-Grained Approaches for the Molecular Dynamics Studies of Conformational Transitions in Proteins
2017
·
Adolfo B. Poma
, Marek Cieplak
, et al.
·
Journal of Chemical Theory and Computation
·
223
GōMartini 3: From large conformational changes in proteins to environmental bias corrections
2025
·
Paulo C. T. Souza
, Luís Borges-Araújo
, et al.
·
Nature Communications
·
111
PDF
The need to implement FAIR principles in biomolecular simulations
2025
·
Rommie E. Amaro
, Johan Åqvist
, et al.
·
Nature Methods
·
90
Molecular insights into receptor binding energetics and neutralization of SARS-CoV-2 variants
2021
·
Melanie Koehler
, Ankita Ray
, et al.
·
Nature Communications
·
72
PDF
Classical to Path-Integral Adaptive Resolution in Molecular Simulation: Towards a Smooth Quantum-Classical Coupling
2010
·
A. B. Poma
, L. Delle Site
·
Physical Review Letters
·
70
PDF
Characterization of Structural and Energetic Differences between Conformations of the SARS-CoV-2 Spike Protein
2020
·
Rodrigo A. Moreira
, Horacio V. Guzman
, et al.
·
Materials
·
61
PDF
Quantitative determination of mechanical stability in the novel coronavirus spike protein
2020
·
Rodrigo A. Moreira
, Mateusz Chwastyk
, et al.
·
Nanoscale
·
61
Mapping Mechanostable Pulling Geometries of a Therapeutic Anticalin/CTLA-4 Protein Complex
2021
·
Zhaowei Liu
, Rodrigo A. Moreira
, et al.
·
Nano Letters
·
46
PDF
Optimizing Gō-MARTINI Coarse-Grained Model for F-BAR Protein on Lipid Membrane
2021
·
Md. Iqbal Mahmood
, Adolfo B. Poma
, et al.
·
Frontiers in Molecular Biosciences
·
44
PDF
Polysaccharide–Protein Complexes in a Coarse-Grained Model
2015
·
Adolfo B. Poma
, Mateusz Chwastyk
, et al.
·
The Journal of Physical Chemistry B
·
37
Recent advances in machine learning and coarse-grained potentials for biomolecular simulations
2025
·
Adolfo B. Poma
, Alejandra Hinostroza Caldas
, et al.
·
Biophysical Journal
·
36
Adaptive resolution simulation of liquid para-hydrogen: testing the robustness of the quantum-classical adaptive coupling
2011
·
A. B. Poma
, L. Delle Site
·
Physical Chemistry Chemical Physics
·
35
Elastic moduli of biological fibers in a coarse-grained model: crystalline cellulose and β-amyloids
2017
·
Adolfo B. Poma
, Mateusz Chwastyk
, et al.
·
Physical Chemistry Chemical Physics
·
34
Mechanical and thermodynamic properties of Aβ 42 , Aβ 40 , and α-synuclein fibrils: a coarse-grained method to complement experimental studies
2019
·
Adolfo Poma
, Horacio Andres Vargas Guzman
, et al.
·
Beilstein Journal of Nanotechnology
·
32
PDF
Generalization of the elastic network model for the study of large conformational changes in biomolecules
2018
·
Adolfo B. Poma
, Mai Suan Li
, et al.
·
Physical Chemistry Chemical Physics
·
31
PDF
Free Energies of the Disassembly of Viral Capsids from a Multiscale Molecular Simulation Approach
2019
·
Matías Martínez
, Christopher D. Cooper
, et al.
·
Journal of Chemical Information and Modeling
·
29
Statistical radii associated with amino acids to determine the contact map: fixing the structure of a type I cohesin domain in the Clostridium thermocellum cellulosome
2015
·
Mateusz Chwastyk
, Adolfo Poma Bernaola
, et al.
·
Physical Biology
·
26
PDF
Nanomechanical Stability of Aβ Tetramers and Fibril-like Structures: Molecular Dynamics Simulations
2021
·
Adolfo B. Poma
, Tran Thi Minh Thu
, et al.
·
The Journal of Physical Chemistry B
·
25
Differentiating between Inactive and Active States of Rhodopsin by Atomic Force Microscopy in Native Membranes
2019
·
Subhadip Senapati
, Adolfo B. Poma
, et al.
·
Analytical Chemistry
·
23
An Overview of Several Inhibitors for Alzheimer’s Disease: Characterization and Failure
2021
·
Subramanian Boopathi
, Adolfo B. Poma
, et al.
·
International Journal of Molecular Sciences
·
22
PDF
Martini 3 Model of Cellulose Microfibrils: On the Route to Capture Large Conformational Changes of Polysaccharides
2022
·
Rodrigo A. Moreira
, Stefan A. L. Weber
, et al.
·
Molecules
·
18
PDF
Single-Molecule Investigation of the Binding Interface Stability of SARS-CoV-2 Variants with ACE2
2024
·
Ankita Ray
, Thu Thi Minh Tran
, et al.
·
ACS Nanoscience Au
·
14
PDF
Conformational and Stability Analysis of SARS-CoV-2 Spike Protein Variants by Molecular Simulation
2025
·
Gustavo E. Olivos-Ramirez
, Luis F. Cofas-Vargas
, et al.
·
Pathogens
·
10
The GōMartini Approach: Revisiting the Concept of Contact Maps and the Modelling of Protein Complexes
2024
·
L.F. Cofas-Vargas
, R.A. Moreira
, et al.
·
Acta Physica Polonica A
·
10
PDF
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Works count:
68
Citation count:
1,767
H-index:
21
I10-index:
26
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