Author

Yujia Xiang

Observed name: Xiang, Yujia

Institutions: Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing Proteome Research Center, Tsinghua University

Observed institutions: Chinese Academy of Sciences, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing Proteome Research Center, Center for Life Sciences, University of Chinese Academy of Sciences, Institute of Zoology, State Key Laboratory of Integrated Management of Pest Insects and Rodents, The Ohio State University, Tsinghua University

ORCID: 0000-0002-5070-6816

Observed ORCID: 0000-0002-5070-6816

OpenAlex ID: A5018649889

A Reference Genome of Bursaphelenchus mucronatus Provides New Resources for Revealing Its Displacement by Pinewood Nematode

2020 · Shuangyang Wu, Shenghan Gao, et al. · Genes · 21

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VPTMdb: a viral posttranslational modification database

2020 · Yujia Xiang, Quan Zou, et al. · Briefings in Bioinformatics · 20

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Pan-Cancer Analysis of Canonical and Modified miRNAs Enhances the Resolution of the Functional miRNAome in Cancer

2022 · Rosario Distefano, Luisa Tomasello, et al. · Cancer Research · 18

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The dynamics of microbiome and virome in migratory birds of southwest China

2025 · Qingqing Luo, Hongyan Gao, et al. · npj Biofilms and Microbiomes · 7

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Use of scREAD to explore and analyze single-cell and single-nucleus RNA-seq data for Alzheimer’s disease

2021 · Cankun Wang, Yujia Xiang, et al. · STAR Protocols · 6

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Cell Decoder: decoding cell identity with multi-scale explainable deep learning

2025 · Jun Zhu, Zeyang Zhang, et al. · Genome biology · 5

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Decoding cell identity with multi-scale explainable deep learning

2024 · Jun Zhu, Zeyang Zhang, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 3

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AnnoProbe: Annotate the Gene Symbols for Probes in Expression Array

2021 · Jianming Zeng, Yujia Xiang · 3

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A concurrent canonical and modified miRNAome pan-cancer study on TCGA and TARGET cohorts leads to an enhanced resolution in cancer

2021 · Rosario Distefano, Luisa Tomasello, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2

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A Concurrent Canonical and Modified miRNAome Pan-Cancer Study on TCGA and TARGET Cohorts Leads to an Enhanced Resolution in Cancer

2021 · Rosario Distefano, Luisa Tomasello, et al. · SSRN Electronic Journal · 1

High-Throughput Discovery of Chiral Carbon-Boron Semimetals with Weyl Topology and Phonon-Mediated Superconductivity

2026 · Yang, Lizhou, Zhao, Wenneng, et al. · arXiv (Cornell University)

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Bioinfoysis Technical Report

2026 · Shao, Qingyang, Zhang, Xin, et al. · arXiv (Cornell University)

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PerturbTrace: Evaluating Feedback Use by AI Co-Scientist Agents in Perturbation Discovery

2026 · Changjie Yu, Siyu Liu, et al. · bioRxiv (Cold Spring Harbor Laboratory)

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MEGA-ODE: Learning Biologically Structured and Navigable Continuous Perturbation Dynamics from Sparse Omics

2026 · Yujia Xiang, Yongge Li, et al. · bioRxiv (Cold Spring Harbor Laboratory)

PertDiffBench: Benchmarking Diffusion Models for Single-Cell Perturbation Response Prediction

2026 · Zijun Song, Yujia Xiang, et al. · bioRxiv (Cold Spring Harbor Laboratory)

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SciCore-Omics: a tri-modal foundation model unifying histology, spatial transcriptomics and language for spatial biology

2026 · Xinyu Xiao, Yunfei Li, et al. · bioRxiv (Cold Spring Harbor Laboratory)

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ChiMER: Integrating chromatin architecture into splicing graphs for chimeric enhancer RNAs detection

2026 · Yujia Xiang, Xinyu Xiao, et al. · bioRxiv (Cold Spring Harbor Laboratory)

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Data from Pan-Cancer Analysis of Canonical and Modified miRNAs Enhances the Resolution of the Functional miRNAome in Cancer