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Andreas Bremges
Observed names:
A. Bremges,
Bremges Andreas,
Bremges, Andreas
Institution:
Evonik (Germany)
Observed institutions:
Joint Genome Institute,
Evonik (Germany),
Bielefeld University,
German Center for Infection Research,
Helmholtz Centre for Infection Research,
Technische Universität Braunschweig
show all 6
ORCID:
0000-0001-6739-7899
Observed ORCID:
0000-0001-6739-7899
OpenAlex ID:
A5020102831
Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
2017
·
Alexander Sczyrba
, Peter Hofmann
, et al.
·
Nature Methods
·
871
PDF
Critical Assessment of Metagenome Interpretation: the second round of challenges
2022
·
Fernando Meyer
, Adrian Fritz
, et al.
·
Nature Methods
·
370
Predicting antimicrobial resistance in Pseudomonas aeruginosa with machine learning‐enabled molecular diagnostics
2020
·
Ariane Khaledi
, Aaron Weimann
, et al.
·
EMBO Molecular Medicine
·
203
PDF
CAMISIM: simulating metagenomes and microbial communities
2019
·
Adrian Fritz
, Peter Hofmann
, et al.
·
Microbiome
·
194
PDF
From Genomes to Phenotypes: Traitar, the Microbial Trait Analyzer
2016
·
Aaron Weimann
, Kyra Mooren
, et al.
·
mSystems
·
170
PDF
Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates
2016
·
Irena Maus
, Daniela E. Koeck
, et al.
·
Biotechnology for Biofuels
·
167
PDF
Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants
2016
·
Yvonne Stolze
, Andreas Bremges
, et al.
·
Biotechnology for Biofuels
·
108
PDF
Bioboxes: standardised containers for interchangeable bioinformatics software
2015
·
Peter Belmann
, Johannes Dröge
, et al.
·
GigaScience
·
85
Assessing taxonomic metagenome profilers with OPAL
2019
·
Fernando Meyer
, Andreas Bremges
, et al.
·
Genome biology
·
79
PDF
Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment
2016
·
Irena Maus
, Katharina Gabriela Cibis
, et al.
·
Journal of Biotechnology
·
74
Tutorial: assessing metagenomics software with the CAMI benchmarking toolkit
2021
·
Fernando Meyer
, Till-Robin Lesker
, et al.
·
Nature Protocols
·
70
PDF
Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant
2015
·
Andreas Bremges
, Irena Maus
, et al.
·
GigaScience
·
70
PDF
Characterisation of a stable laboratory co-culture of acidophilic nanoorganisms
2017
·
Susanne Krause
, Andreas Bremges
, et al.
·
Scientific Reports
·
58
PDF
Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes
2017
·
Irena Maus
, Andreas Bremges
, et al.
·
Biotechnology for Biofuels
·
55
PDF
Critical Assessment of Metagenome Interpretation - the second round of challenges
2021
·
F. Meyer
, A. Fritz
, et al.
·
bioRxiv (Cold Spring Harbor Laboratory)
·
42
PDF
Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants
2017
·
Yvonne Stolze
, Andreas Bremges
, et al.
·
Microbial Biotechnology
·
39
PDF
Investigation of different nitrogen reduction routes and their key microbial players in wood chip-driven denitrification beds
2017
·
Victoria Grießmeier
, Andreas Bremges
, et al.
·
Scientific Reports
·
39
PDF
Haploflow: strain-resolved de novo assembly of viral genomes
2021
·
A. Fritz
, A. Bremges
, et al.
·
Genome biology
·
36
PDF
An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant
2016
·
Vera Ortseifen
, Yvonne Stolze
, et al.
·
Journal of Biotechnology
·
31
CAMISIM: Simulating metagenomes and microbial communities
2018
·
Adrian Fritz
, Peter Hofmann
, et al.
·
bioRxiv (Cold Spring Harbor Laboratory)
·
29
PDF
Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344
2014
·
Daniel Wibberg
, Víctor M. Luque-Almagro
, et al.
·
Journal of Biotechnology
·
23
Metagenomics and CAZyme Discovery
2017
·
Benoit J. Kunath
, Andreas Bremges
, et al.
·
Methods in molecular biology
·
22
A roadmap for equitable reuse of public microbiome data
2025
·
Laura A. Hug
, Roland Hatzenpichler
, et al.
·
Nature Microbiology
·
21
PDF
Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing
2016
·
Daniel Wibberg
, Andreas Bremges
, et al.
·
Journal of Biotechnology
·
18
STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies
2025
·
Julia M. Kelliher
, Chloe Mirzayi
, et al.
·
Nature Microbiology
·
16
PDF
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Works count:
87
Citation count:
3,005
H-index:
22
I10-index:
31
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