Author

Jesse C. J. van Dam

Observed names: Dam, Jesse Van, Jesse C J van Dam, Jesse C. J. Van Dam, Jesse C.J. van Dam, Jesse CJ van Dam, Jesse Cj Van Dam, Jesse Van Dam, Jesse van Dam, van Dam, Jesse, van Dam, Jesse C. J.

Institution: Wageningen University & Research

Observed institution: Wageningen University & Research

ORCID: 0000-0001-9395-5559

Observed ORCID: 0000-0001-9395-5559

OpenAlex ID: A5021255484

NG-Tax 2.0: A Semantic Framework for High-Throughput Amplicon Analysis

2020 · Wasin Poncheewin, Gerben D. A. Hermes, et al. · Frontiers in Genetics · 157

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Comparison of 432 Pseudomonas strains through integration of genomic, functional, metabolic and expression data

2016 · Jasper J. Koehorst, Jesse C. J. van Dam, et al. · Scientific Reports · 84

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GeneFriends: An online co-expression analysis tool to identify novel gene targets for aging and complex diseases

2012 · Sipko van Dam, Rui Cordeiro, et al. · BMC Genomics · 72

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SAPP: functional genome annotation and analysis through a semantic framework using FAIR principles

2017 · Jasper J Koehorst, Jesse C J van Dam, et al. · Bioinformatics · 58

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Regulation of Three Virulence Strategies of Mycobacterium tuberculosis: A Success Story

2018 · Niels Zondervan, Jesse Van Dam, et al. · International Journal of Molecular Sciences · 50

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Consistency, Inconsistency, and Ambiguity of Metabolite Names in Biochemical Databases Used for Genome-Scale Metabolic Modelling

2019 · Nhung Pham, Ruben Van Heck, et al. · Metabolites · 44

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The Empusa code generator and its application to GBOL, an extendable ontology for genome annotation

2019 · Jesse C. J. van Dam, Jasper J. Koehorst, et al. · Scientific Data · 20

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RDF2Graph a tool to recover, understand and validate the ontology of an RDF resource

2015 · Jesse CJ van Dam, Jasper J Koehorst, et al. · Journal of Biomedical Semantics · 19

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Integration of heterogeneous molecular networks to unravel gene-regulation in Mycobacterium tuberculosis

2014 · Jesse CJ van Dam, Peter J Schaap, et al. · BMC Systems Biology · 18

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Interoperable genome annotation with GBOL, an extendable infrastructure for functional data mining

2017 · Jesse C.J. van Dam, Jasper J. Koehorst, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 16

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SALARECON connects the Atlantic salmon genome to growth and feed efficiency

2022 · Maksim Zakhartsev, Filip Rotnes, et al. · PLoS Computational Biology · 11

The Empusa code generator: bridging the gap between the intended and the actual content of RDF resources

2018 · van Dam, Jesse C. J., Koehorst, Jasper J., et al. · arXiv (Cornell University) · 5

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SyNDI: synchronous network data integration framework

2018 · Erno Lindfors, Jesse C. J. van Dam, et al. · BMC Bioinformatics · 3

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Towards Computational Evaluation of Evidence for Scientific Assertions with Nanopublications.

2012 · Andrew P. Gibson, Jesse C. J. van Dam, et al. · SWAT4LS · 3

Semantic systems biology of prokaryotes : heterogeneous data integration to understand bacterial metabolism

2019 · Jesse C.J. van Dam · 1

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Additional file 6: of SyNDI: synchronous network data integration framework