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Ruofan Ding

Observed names: Ding, Ruo-Fan, Ruo-Fan Ding, Ruo‐Fan Ding
ORCID: 0000-0003-1667-9866
Observed ORCID: 0000-0003-1667-9866
OpenAlex ID: A5024571968
Genome-wide survey of tissue-specific microRNA and transcription factor regulatory networks in 12 tissues
2014 · Zhiyun Guo, Miranda Maki, et al. · Scientific Reports · 233
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scQTLbase: an integrated human single-cell eQTL database
2023 · Ruofan Ding, Qixuan Wang, et al. · Nucleic Acids Research · 59
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EnhancerDB: a resource of transcriptional regulation in the context of enhancers
2018 · Ran Kang, Yiming Zhang, et al. · Database · 42
Identification and Analysis of P53-Mediated Competing Endogenous RNA Network in Human Hepatocellular Carcinoma
2017 · Yiming Zhang, Ran Kang, et al. · International Journal of Biological Sciences · 42
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Genome-wide Identification and Characterization of Enhancers Across 10 Human Tissues
2018 · Lili Xiong, Ran Kang, et al. · International Journal of Biological Sciences · 41
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xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs
2023 · Ruofan Ding, Xudong Zou, et al. · Briefings in Bioinformatics · 25
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Comprehensive Expression Profiling and Functional Network Analysis of p53-Regulated MicroRNAs in HepG2 Cells Treated with Doxorubicin
2016 · Yalan Yang, Wenrong Liu, et al. · PLoS ONE · 22
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A distinct class of pan-cancer susceptibility genes revealed by an alternative polyadenylation transcriptome-wide association study
2024 · Hui Chen, Zeyang Wang, et al. · Nature Communications · 19
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Immune-response 3′UTR alternative polyadenylation quantitative trait loci contribute to variation in human complex traits and diseases
2023 · Lei Li, Xuelian Ma, et al. · Nature Communications · 15
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ipaQTL-atlas: an atlas of intronic polyadenylation quantitative trait loci across human tissues
2022 · Xuelian Ma, Shumin Cheng, et al. · Nucleic Acids Research · 13
Nphos: Database and Predictor of Protein N -phosphorylation
2024 · Ming-Xiao Zhao, Ruo-Fan Ding, et al. · Genomics Proteomics & Bioinformatics · 10
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Down-regulation expression of TGFB2-AS1 inhibits the proliferation, migration, invasion and induces apoptosis in HepG2 cells
2019 · Wenrong Liu, Ruiping Huai, et al. · Genes & Genomics · 10
Determination of the Amino Acid Recruitment Order in Early Life by Genome-Wide Analysis of Amino Acid Usage Bias
2022 · Mingxiao Zhao, Ruofan Ding, et al. · Biomolecules · 9
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Transcriptome profiling analysis of differentially expressed mRNAs and lncRNAs in HepG2 cells treated with peptide 9R-P201
2017 · Wenrong Liu, Ruofan Ding, et al. · Biotechnology Letters · 8
eRNA-IDO: A One-stop Platform for Identification, Interactome Discovery, and Functional Annotation of Enhancer RNAs
2024 · Yuwei Zhang, Lihai Gong, et al. · Genomics Proteomics & Bioinformatics · 6
Mining Real-World Big Data to Characterize Adverse Drug Reaction Quantitatively: Mixed Methods Study
2024 · Qi-Xuan Yue, Ruo-Fan Ding, et al. · Journal of Medical Internet Research · 6
Gene network analyses unveil possible molecular basis underlying drug-induced glaucoma
2021 · Ruo-Fan Ding, Qian Yu, et al. · BMC Medical Genomics · 5
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Using population-scale transcriptomic and genomic data to map 3′ UTR alternative polyadenylation quantitative trait loci
2022 · Xudong Zou, Ruofan Ding, et al. · STAR Protocols · 4
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Broad‐Spectrum Profiling of Drug Safety via Learning Complex Network
2019 · Ke Liu, Ruo‐Fan Ding, et al. · Clinical Pharmacology & Therapeutics · 4
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Multimodal-based analysis of single-cell ATAC-seq data enables highly accurate delineation of clinically relevant tumor cell subpopulations
2026 · Kewei Xiong, Wei Wang, et al. · Genome Medicine · 2
Discovering Innate Driver Variants for Risk Assessment of Early Colorectal Cancer Metastasis
2022 · Ruo-Fan Ding, Yun Zhang, et al. · Frontiers in Oncology · 1
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Additional file 2 of Gene network analyses unveil possible molecular basis underlying drug-induced glaucoma
2021 · Ding, Ruo-Fan, Yu, Qian, et al. · Figshare
Transcriptome Sequencing Analysis of Hepatocellular Carcinoma HepG2 Cells Induced by Antitumor Peptide 9R-P201
2017 · Liu Wenrong, Ruofan Ding, et al.
阿霉素诱导下的肝癌细胞HepG2 中微小RNA 差异表达分析
2016 · 杨亚蓝, Yalan Yang, et al.
Works count: 24
Citation count: 576
H-index: 10
I10-index: 12
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