Author

Lars Barquist

Observed names: Barquist Lars Barquist, Barquist, Lars, L. Barquist, Lars E. Barquist

Institutions: University of Toronto, University of Würzburg, Helmholtz Centre for Infection Research, Helmholtz Institute for RNA-based Infection Research

Observed institutions: European Bioinformatics Institute, Howard Hughes Medical Institute, University of Toronto, Janelia Research Campus, University of Würzburg, Wellcome Sanger Institute, Yale University, University of Oxford, Helmholtz Centre for Infection Research, Helmholtz Institute for RNA-based Infection Research, University of California, Berkeley

ORCID: 0000-0003-4732-2667

Observed ORCID: 0000-0003-4732-2667

OpenAlex ID: A5026823964

Rfam 11.0: 10 years of RNA families

2012 · Sarah W. Burge, Jennifer Daub, et al. · Nucleic Acids Research · 807

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Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions

2016 · Alexander J. Westermann, Konrad U. Förstner, et al. · Nature · 499

A decade of advances in transposon-insertion sequencing

2020 · Amy K. Cain, Lars Barquist, et al. · Nature Reviews Genetics · 394

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Resolving host–pathogen interactions by dual RNA-seq

2017 · Alexander J. Westermann, Lars Barquist, et al. · PLoS Pathogens · 289

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Global RNA recognition patterns of post‐transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo

2016 · Erik Holmqvist, Patrick R Wright, et al. · The EMBO Journal · 285

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Patterns of genome evolution that have accompanied host adaptation in Salmonella

2014 · Gemma C. Langridge, Maria Fookes, et al. · Proceedings of the National Academy of Sciences · 240

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The TraDIS toolkit: sequencing and analysis for dense transposon mutant libraries

2016 · Lars Barquist, Matthew Mayho, et al. · Bioinformatics · 230

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Distinct Salmonella Enteritidis lineages associated with enterocolitis in high-income settings and invasive disease in low-income settings

2016 · Nicholas A Feasey, James Hadfield, et al. · Nature Genetics · 216

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An amphipathic peptide with antibiotic activity against multidrug-resistant Gram-negative bacteria

2020 · Alysha G. Elliott, Johnny X. Huang, et al. · Nature Communications · 199

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High-Throughput Analysis of Gene Essentiality and Sporulation in Clostridium difficile

2015 · Marcin Dembek, Lars Barquist, et al. · mBio · 183

Parallel independent evolution of pathogenicity within the genus Yersinia

2014 · Sandra Reuter, Thomas R. Connor, et al. · Proceedings of the National Academy of Sciences · 165

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Approaches to querying bacterial genomes with transposon-insertion sequencing

2013 · Lars Barquist, Christine J. Boinett, et al. · RNA Biology · 159

Noncanonical crRNAs derived from host transcripts enable multiplexable RNA detection by Cas9

2021 · Chunlei Jiao, Sahil Sharma, et al. · Science · 152

Global Maps of ProQ Binding In Vivo Reveal Target Recognition via RNA Structure and Stability Control at mRNA 3′ Ends

2018 · Erik Holmqvist, Lei Li, et al. · Molecular Cell · 147

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Signatures of Adaptation in Human Invasive Salmonella Typhimurium ST313 Populations from Sub-Saharan Africa

2015 · Chinyere K. Okoro, Lars Barquist, et al. · PLoS neglected tropical diseases · 131

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Functional genomics reveals that Clostridium difficileSpo0A coordinates sporulation, virulence and metabolism

2014 · Laura J Pettit, Hilary P Browne, et al. · BMC Genomics · 127

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A comparison of dense transposon insertion libraries in the Salmonella serovars Typhi and Typhimurium

2013 · Lars Barquist, Gemma C. Langridge, et al. · Nucleic Acids Research · 121

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RNA target profiles direct the discovery of virulence functions for the cold-shock proteins CspC and CspE

2017 · Charlotte Michaux, Erik Holmqvist, et al. · Proceedings of the National Academy of Sciences · 114

Accelerating Discovery and Functional Analysis of Small RNAs with New Technologies

2015 · Lars Barquist, Jörg Vogel · Annual Review of Genetics · 111

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The agr Locus Regulates Virulence and Colonization Genes in Clostridium difficile 027

2013 · Melissa J. Martin, Simon Clare, et al. · Journal of Bacteriology · 102

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Machine learning identifies signatures of host adaptation in the bacterial pathogen Salmonella enterica

2018 · Nicole E. Wheeler, Paul P. Gardner, et al. · PLoS Genetics · 99

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A High-Resolution View of Genome-Wide Pneumococcal Transformation

2012 · Nicholas J. Croucher, Simon R. Harris, et al. · PLoS Pathogens · 99

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RNIE: genome-wide prediction of bacterial intrinsic terminators

2011 · P. P. Gardner, L. Barquist, et al. · Nucleic Acids Research · 94

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A high-resolution transcriptome map identifies small RNA regulation of metabolism in the gut microbe Bacteroides thetaiotaomicron

2020 · Daniel Ryan, Laura Jenniches, et al. · Nature Communications · 81

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Dominant Role of Nucleotide Substitution in the Diversification of Serotype 3 Pneumococci over Decades and during a Single Infection

2013 · Nicholas J. Croucher, Andrea M. Mitchell, et al. · PLoS Genetics · 77

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Works count: 129

Citation count: 6,740

H-index: 36

I10-index: 74