Author

Dhirendra Kumar

Observed names: D. Kumar, D. Thirumal Kumar, DHIRENDRA KUMAR

Institution: Darbhanga Medical College and Hospital

Observed institutions: Chandigarh University, National Center for Disease Control, National Institutes of Health, Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir, Institute of Genomics and Integrative Biology, QIMR Berghofer Medical Research Institute, Sher-e-Kashmir University of Agricultural Sciences and Technology of Jammu, Darbhanga Medical College and Hospital, Baba Ghulam Shah Badshah University, National Institute of Environmental Health Sciences, Council of Scientific and Industrial Research

ORCID: 0000-0002-4349-3605

Observed ORCID: 0000-0002-4349-3605

OpenAlex ID: A5027843697

Proteogenomic Analysis of Mycobacterium tuberculosis By High Resolution Mass Spectrometry

2011 · Dhanashree S. Kelkar, Dhirendra Kumar, et al. · Molecular & Cellular Proteomics · 202

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Integrating transcriptome and proteome profiling: Strategies and applications

2016 · Dhirendra Kumar, Gourja Bansal, et al. · PROTEOMICS · 194

EGLN1 involvement in high-altitude adaptation revealed through genetic analysis of extreme constitution types defined in Ayurveda

2010 · Shilpi Aggarwal, Sapna Negi, et al. · Proceedings of the National Academy of Sciences · 183

Multi-omic Profiling Reveals Dynamics of the Phased Progression of Pluripotency

2019 · Pengyi Yang, Sean J. Humphrey, et al. · Cell Systems · 146

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Decoding the function of bivalent chromatin in development and cancer

2021 · Dhirendra Kumar, Senthilkumar Cinghu, et al. · Genome Research · 144

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Transcriptome and venom proteome of the box jellyfish Chironex fleckeri

2015 · Diane L Brinkman, Xinying Jia, et al. · BMC Genomics · 121

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Intragenic Enhancers Attenuate Host Gene Expression

2017 · Senthilkumar Cinghu, Pengyi Yang, et al. · Molecular Cell · 108

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NF-Y controls fidelity of transcription initiation at gene promoters through maintenance of the nucleosome-depleted region

2019 · Andrew J. Oldfield, Telmo Henriques, et al. · Nature Communications · 96

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A Systematic Analysis of Eluted Fraction of Plasma Post Immunoaffinity Depletion: Implications in Biomarker Discovery

2011 · Amit Kumar Yadav, Gourav Bhardwaj, et al. · PLoS ONE · 90

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Reassessment of temperature-humidity index for measuring heat stress in crossbred dairy cattle of a sub-tropical region

2019 · Rakhshan Jeelani, Dipanjali Konwar, et al. · Journal of Thermal Biology · 83

GLIS3 is indispensable for TSH/TSHR-dependent thyroid hormone biosynthesis and follicular cell proliferation

2017 · Hong Soon Kang, Dhirendra Kumar, et al. · Journal of Clinical Investigation · 75

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Polyketide Quinones Are Alternate Intermediate Electron Carriers during Mycobacterial Respiration in Oxygen-Deficient Niches

2015 · Amitesh Anand, Priyanka Verma, et al. · Molecular Cell · 61

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Expression profiling of lymph nodes in tuberculosis patients reveal inflammatory milieu at site of infection

2015 · Abhijit Maji, Richa Misra, et al. · Scientific Reports · 60

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MassWiz: A Novel Scoring Algorithm with Target-Decoy Based Analysis Pipeline for Tandem Mass Spectrometry

2011 · Amit Kumar Yadav, Dhirendra Kumar, et al. · Journal of Proteome Research · 49

False discovery rate: the Achilles’ heel of proteogenomics

2022 · Suruchi Aggarwal, Anurag Raj, et al. · Briefings in Bioinformatics · 45

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Proteogenomic Analysis of Bradyrhizobium japonicum USDA110 Using Genosuite, an Automated Multi-algorithmic Pipeline

2013 · Dhirendra Kumar, Amit Kumar Yadav, et al. · Molecular & Cellular Proteomics · 43

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Choosing an Optimal Database for Protein Identification from Tandem Mass Spectrometry Data

2016 · Dhirendra Kumar, Amit Kumar Yadav, et al. · Methods in molecular biology · 41

Delineation of temperature-humidity index (THI) as indicator of heat stress in riverine buffaloes (Bubalus bubalis) of a sub-tropical Indian region

2021 · Sofi Imran Ul Umar, Dipanjali Konwar, et al. · Cell Stress and Chaperones · 37

Integrated genomic view of SARS-CoV-2 in India

2020 · Pramod Kumar, Rajesh Pandey, et al. · Wellcome Open Research · 37

GLIS3 Transcriptionally Activates WNT Genes to Promote Differentiation of Human Embryonic Stem Cells into Posterior Neural Progenitors

2018 · Kilsoo Jeon, Dhirendra Kumar, et al. · Stem Cells · 36

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Integrated Transcriptomic-Proteomic Analysis Using a Proteogenomic Workflow Refines Rat Genome Annotation

2015 · Dhirendra Kumar, Amit Kumar Yadav, et al. · Molecular & Cellular Proteomics · 35

Integration Host Factor of Mycobacterium tuberculosis, mIHF, Compacts DNA by a Bending Mechanism

2013 · Arpit Mishra, Manika Vij, et al. · PLoS ONE · 28

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Learning from Decoys to Improve the Sensitivity and Specificity of Proteomics Database Search Results

2012 · Amit Kumar Yadav, Dhirendra Kumar, et al. · PLoS ONE · 19

Spectrum of large copy number variations in 26 diverse Indian populations: potential involvement in phenotypic diversity

2011 · Pramod Gautam, Pankaj Jha, et al. · Human Genetics · 18

Discovery of rare protein‐coding genes in model methylotroph Methylobacterium extorquens AM1

2014 · Dhirendra Kumar, Anupam Kumar Mondal, et al. · PROTEOMICS · 17

Works count: 55

Citation count: 2,081

H-index: 22

I10-index: 31