Author

Marina Bessarabova

Observed names: M Bessarabova, Marina B. Bessarabova, Бессарабова Марина Борисовна

Observed institutions: Russian Academy of Sciences, Harvard University, Johns Hopkins University, Johns Hopkins Medicine, Vavilov Institute of General Genetics, Thomson Reuters (United States)

OpenAlex ID: A5028186044

The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance

2014 · Charles Wang, Binsheng Gong, et al. · Nature Biotechnology · 526

Comparison of RNA-seq and microarray-based models for clinical endpoint prediction

2015 · Wenqian Zhang, Ying Yu, et al. · Genome biology · 405

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Drug Target Prediction and Repositioning Using an Integrated Network-Based Approach

2013 · Dorothea Emig, Alexander Ivliev, et al. · PLoS ONE · 248

JARID1B Is a Luminal Lineage-Driving Oncogene in Breast Cancer

2014 · Shoji Yamamoto, Zhenhua Wu, et al. · Cancer Cell · 209

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An investigation of biomarkers derived from legacy microarray data for their utility in the RNA-seq era

2014 · Zhenqiang Su, Hong Fang, et al. · Genome biology · 188

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Epigenetic Regulation of Cell Type–Specific Expression Patterns in the Human Mammary Epithelium

2011 · Reo Maruyama, Sibgat Choudhury, et al. · PLoS Genetics · 112

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Knowledge-based analysis of proteomics data

2012 · Marina Bessarabova, Alexander Ishkin, et al. · BMC Bioinformatics · 101

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Systems-Based Analyses of Brain Regions Functionally Impacted in Parkinson's Disease Reveals Underlying Causal Mechanisms

2014 · Brigit E. Riley, Shyra J. Gardai, et al. · PLoS ONE · 82

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Molecular Profiling of Human Mammary Gland Links Breast Cancer Risk to a p27+ Cell Population with Progenitor Characteristics

2013 · Sibgat Choudhury, Vanessa Almendro, et al. · Cell stem cell · 77

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Bimodal gene expression patterns in breast cancer

2010 · Marina Bessarabova, Eugene Kirillov, et al. · BMC Genomics · 58

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Altered antisense-to-sense transcript ratios in breast cancer

2010 · Reo Maruyama, Michail Shipitsin, et al. · Proceedings of the National Academy of Sciences · 57

Development of a Drug-Response Modeling Framework to Identify Cell Line Derived Translational Biomarkers That Can Predict Treatment Outcome to Erlotinib or Sorafenib

2015 · Bin Li, Hyunjin Shin, et al. · PLoS ONE · 55

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Use of Short-term Transcriptional Profiles to Assess the Long-term Cancer-Related Safety of Environmental and Industrial Chemicals

2009 · Russell S. Thomas, Wenjun Bao, et al. · Toxicological Sciences · 50

Functional analysis of multiple genomic signatures demonstrates that classification algorithms choose phenotype-related genes

2010 · W Shi, M Bessarabova, et al. · The Pharmacogenomics Journal · 42

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Gene expression profiling of human breast tissue samples using SAGE-Seq

2010 · Zhenhua Jeremy Wu, Clifford A. Meyer, et al. · Genome Research · 41

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An Integrated Map of HIV-Human Protein Complexes that Facilitate Viral Infection

2014 · Dorothea Emig-Agius, Kevin Olivieri, et al. · PLoS ONE · 12

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Functional Synergies yet Distinct Modulators Affected by Genetic Alterations in Common Human Cancers

2011 · Marina Bessarabova, Olga Pustovalova, et al. · Cancer Research · 12

Pathways and Networks as Functional Descriptors for Human Disease and Drug Response Endpoints

2011 · Yuri Nikolsky, Marina Bessarabova, et al. · Wiley eBooks · 2

Use of the Unified Information and Analysis System of Rospotrebnadzor in Analyzing the Incidence of Parenteral Viral Hepatitis B and C on the Example of the Nizhny Novgorod Region

2025 · Anna D. Kashnikova, Anastasia V. Polyanina, et al. · ЗДОРОВЬЕ НАСЕЛЕНИЯ И СРЕДА ОБИТАНИЯ - ЗНиСО / PUBLIC HEALTH AND LIFE ENVIRONMENT · 1

The Tale of Underlying Biology: Functional Analysis of Multivariant Gene Classifiers (Gene Signatures) in the MAQCII Project

2014 · Marina Bessarabova, Tatiana Nikolskaya, et al. · 1

Supplementary Excel File 20 from Functional Synergies yet Distinct Modulators Affected by Genetic Alterations in Common Human Cancers