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Angela Simeone

Landscape of G-quadruplex DNA structural regions in breast cancer
2020 · Robert Hänsel-Hertsch, Angela Simeone, et al. · Nature Genetics · 234
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G-quadruplex DNA structure is a positive regulator of MYC transcription
2024 · Isabel Esain-Garcia, Angie Kirchner, et al. · Proceedings of the National Academy of Sciences · 160
Sperm is epigenetically programmed to regulate gene transcription in embryos
2016 · Marta Teperek, Angela Simeone, et al. · Genome Research · 141
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G-quadruplex DNA structures in human stem cells and differentiation
2022 · Katherine G. Zyner, Angela Simeone, et al. · Nature Communications · 130
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Promoter G-quadruplex folding precedes transcription and is controlled by chromatin
2021 · Jiazhen Shen, Dhaval Varshney, et al. · Genome biology · 124
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H3K4 Methylation-Dependent Memory of Somatic Cell Identity Inhibits Reprogramming and Development of Nuclear Transfer Embryos
2017 · Eva Hörmanseder, Angela Simeone, et al. · Cell stem cell · 122
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DNA G-Quadruplex Recognition In Vitro and in Live Cells by a Structure-Specific Nanobody
2022 · Silvia Galli, Larry Melidis, et al. · Journal of the American Chemical Society · 101
Single-cell mapping of DNA G-quadruplex structures in human cancer cells
2021 · Winnie W. I. Hui, Angela Simeone, et al. · Scientific Reports · 90
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Plk4 and Aurora A cooperate in the initiation of acentriolar spindle assembly in mammalian oocytes
2017 · Leah Bury, Paula A. Coelho, et al. · The Journal of Cell Biology · 68
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Epigenetic homogeneity in histone methylation underlies sperm programming for embryonic transcription
2020 · Mami Oikawa, Angela Simeone, et al. · Nature Communications · 65
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An Upstream G-Quadruplex DNA Structure Can Stimulate Gene Transcription
2024 · Yuqi Chen, Angela Simeone, et al. · ACS Chemical Biology · 42
Optical control of gene expression using a DNA G-quadruplex targeting reversible photoswitch
2025 · Xiaoyun Zhang, Somdutta Dhir, et al. · Nature Chemistry · 41
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The Expression of TALEN before Fertilization Provides a Rapid Knock-Out Phenotype in Xenopus laevis Founder Embryos
2015 · Kei Miyamoto, Ken-ichi T. Suzuki, et al. · PLoS ONE · 16
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A Photoredox Reaction for the Selective Modification of 5-Carboxycytosine in DNA
2023 · Benjamin J. Mortishire-Smith, Sidney M. Becker, et al. · Journal of the American Chemical Society · 13
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Improved simultaneous mapping of epigenetic features and 3D chromatin structure via ViCAR
2024 · Sean M. Flynn, Somdutta Dhir, et al. · Genome biology · 11
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Histone H3 lysine 9 trimethylation is required for suppressing the expression of an embryonically activated retrotransposon in Xenopus laevis
2015 · Sarah Herberg, Angela Simeone, et al. · Scientific Reports · 11
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Selective Photocatalytic C−H Oxidation of 5‐Methylcytosine in DNA
2024 · Tao Yan, Yuqi Chen, et al. · Angewandte Chemie · 9
SCoTCH-seq reveals that 5-hydroxymethylcytosine encodes regulatory information across DNA strands
2025 · Jack S. Hardwick, Somdutta Dhir, et al. · Proceedings of the National Academy of Sciences · 8
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Detection of Circulating mRNA Variants in Hepatocellular Carcinoma Patients Using Targeted RNAseq
2025 · Daniel Zezulinski, Maarouf A. Hoteit, et al. · Liver Cancer · 5
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Sperm and Spermatids Contain Different Proteins and Bind Distinct Egg Factors
2014 · Marta Teperek, Kei Miyamoto, et al. · International Journal of Molecular Sciences · 5
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Revealing Molecular Mechanisms by Integrating High-Dimensional Functional Screens with Protein Interaction Data
2014 · Angela Simeone, Giovanni Marsico, et al. · PLoS Computational Biology · 3
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HM-DyadCap – capture and mapping of 5-hydroxymethylcytosine/5-methylcytosine CpG dyads in mammalian DNA
2026 · Lena Engelhard, Damian Schiller, et al. · Nucleic Acids Research · 2
Fragment-level Integration of Epigenetic and Genetic Signals for Ultra-sensitive ctDNA Detection in Liquid Biopsy and MRD Applications
2026 · Pawel Gardzielewski, Leonardo Motta, et al. · The Journal of Liquid Biopsy
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Removal of End-repair Reduces Hypomethylation Artefacts and Improves ctDNA Detection and Tissue-of-origin Determination in cfDNA Assays
2026 · Anaïs Dabbadie, Leonardo Motta, et al. · The Journal of Liquid Biopsy
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Integrated 6-base cfDNA Profiling Reveals Complementary Genetic, Epigenetic and Fragmentomic Biomarkers, Enabling Optimal Biomarker Combinations for Cancer Detection
2026 · Leonardo Motta, Fabio Puddu, et al. · The Journal of Liquid Biopsy
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Works count: 49
Citation count: 1,403
H-index: 13
I10-index: 16
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