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Author

Samuel Leandro Hong

Observed names: Hong, Samuel, Hong, Samuel L., Hong, Samuel Leandro, S Hong, S. Hong, Samuel Hong, Samuel L Hong, Samuel L. Hong
Observed institutions: University of East Anglia, Universidad Complutense de Madrid, University of Minnesota, Hebrew University of Jerusalem, Rega Institute for Medical Research, Quadram Institute, University of Illinois Chicago, Onze Lieve Vrouwziekenhuis Hospital, Institute for Medical Research, Minnesota Department of Health, Optimum Patient Care, KU Leuven
ORCID: 0000-0001-6354-4943
Observed ORCID: 0000-0001-6354-4943
OpenAlex ID: A5038540723
Untangling introductions and persistence in COVID-19 resurgence in Europe
2021 · Philippe Lemey, Nick Ruktanonchai, et al. · Nature · 194
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Accommodating individual travel history and unsampled diversity in Bayesian phylogeographic inference of SARS-CoV-2
2020 · Philippe Lemey, Samuel L. Hong, et al. · Nature Communications · 165
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Salmonella enterica Serotype 4,[5],12:i:- in Swine in the United States Midwest: An Emerging Multidrug-Resistant Clade
2017 · Ehud Elnekave, Samuel Hong, et al. · Clinical Infectious Diseases · 110
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A Phylodynamic Workflow to Rapidly Gain Insights into the Dispersal History and Dynamics of SARS-CoV-2 Lineages
2020 · Simon Dellicour, Keith Durkin, et al. · Molecular Biology and Evolution · 92
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Emergence and spread of SARS-CoV-2 lineage B.1.620 with variant of concern-like mutations and deletions
2021 · Gytis Dudas, Samuel L. Hong, et al. · Nature Communications · 76
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Serotypes and Antimicrobial Resistance in Salmonella enterica Recovered from Clinical Samples from Cattle and Swine in Minnesota, 2006 to 2015
2016 · Samuel Hong, Albert Rovira, et al. · PLoS ONE · 70
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Global spatial dynamics and vaccine-induced fitness changes of Bordetella pertussis
2022 · Noémie Lefrancq, Valérie Bouchez, et al. · Science Translational Medicine · 66
Genetic Determinants of Resistance to Extended-Spectrum Cephalosporin and Fluoroquinolone in Escherichia coli Isolated from Diseased Pigs in the United States
2020 · Shivdeep Singh Hayer, Seunghyun Lim, et al. · mSphere · 48
Genomic sequencing of SARS-CoV-2 in Rwanda reveals the importance of incoming travelers on lineage diversity
2021 · Yvan Butera, Enatha Mukantwari, et al. · Nature Communications · 38
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Dispersal dynamics of SARS-CoV-2 lineages during the first epidemic wave in New York City
2021 · Simon Dellicour, Samuel L. Hong, et al. · PLoS Pathogens · 38
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Antibody escape and global spread of SARS-CoV-2 lineage A.27
2022 · Tamara Kaleta, Lisa Kern, et al. · Nature Communications · 31
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Changes in Control Status of COPD Over Time and Their Consequences: A Prospective International Study
2020 · Marc Miravitlles, Marc Miravitlles, et al. · Archivos de Bronconeumología · 30
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Comparing serotyping with whole-genome sequencing for subtyping of non-typhoidal Salmonella enterica: a large-scale analysis of 37 serotypes with a public health impact in the USA
2020 · Ehud Elnekave, Samuel L. Hong, et al. · Microbial Genomics · 28
Untangling lineage introductions, persistence and transmission drivers of HP-PRRSV sublineage 8.7
2024 · Yankuo Sun, Jiabao Xing, et al. · Nature Communications · 27
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Bayesian Phylogeographic Analysis Incorporating Predictors and Individual Travel Histories in BEAST
2021 · Samuel L. Hong, Philippe Lemey, et al. · Current Protocols · 27
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Transmission of Multidrug-Resistant Salmonella enterica Subspecies enterica 4,[5],12:i:- Sequence Type 34 between Europe and the United States
2020 · Ehud Elnekave, Samuel L. Hong, et al. · Emerging infectious diseases · 27
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Circumpolar spread of avian influenza H5N1 to southern Indian Ocean islands
2025 · Augustin Clessin, François-Xavier Briand, et al. · Nature Communications · 26
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Circulation of Plasmids Harboring Resistance Genes to Quinolones and/or Extended-Spectrum Cephalosporins in Multiple Salmonella enterica Serotypes from Swine in the United States
2019 · Ehud Elnekave, Samuel L. Hong, et al. · Antimicrobial Agents and Chemotherapy · 22
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Snapshot of the evolution and mutation patterns of SARS-CoV-2
2020 · Jin Zhao, Jiumeng Sun, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 21
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In Search of Covariates of HIV-1 Subtype B Spread in the United States—A Cautionary Tale of Large-Scale Bayesian Phylogeography
2020 · Samuel L. Hong, Simon Dellicour, et al. · Viruses · 19
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Ecological Changes Exacerbating the Spread of Invasive Ticks has Driven the Dispersal of Severe Fever with Thrombocytopenia Syndrome Virus Throughout Southeast Asia
2024 · Lester J Pérez, Guy Baele, et al. · Molecular Biology and Evolution · 18
Delta-Omicron recombinant escapes therapeutic antibody neutralization
2023 · Ralf Duerr, Hao Zhou, et al. · iScience · 18
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Exploiting genomic surveillance to map the spatio-temporal dispersal of SARS-CoV-2 spike mutations in Belgium across 2020
2021 · Nena Bollen, Maria Artesi, et al. · Scientific Reports · 18
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Variant-specific introduction and dispersal dynamics of SARS-CoV-2 in New York City – from Alpha to Omicron
2023 · Simon Dellicour, Samuel L. Hong, et al. · PLoS Pathogens · 17
Two Years of Genomic Surveillance in Belgium during the SARS-CoV-2 Pandemic to Attain Country-Wide Coverage and Monitor the Introduction and Spread of Emerging Variants
2022 · Lize Cuypers, Simon Dellicour, et al. · Viruses · 17
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Works count: 65
Citation count: 1,376
H-index: 19
I10-index: 29
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