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Author

Arsenij Ustjanzew

Observed names: A. Ustjanzev, Ustjanzew, Arsenij
ORCID: 0000-0002-1014-4521
Observed ORCID: 0000-0002-1014-4521
OpenAlex ID: A5039591070
Interactive and Reproducible Workflows for Exploring and Modeling RNA‐seq Data with pcaExplorer, Ideal, and GeneTonic
2022 · Annekathrin Ludt, Arsenij Ustjanzew, et al. · Current Protocols · 29
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GD2 Expression in Medulloblastoma and Neuroblastoma for Personalized Immunotherapy: A Matter of Subtype
2022 · Claudia Paret, Arsenij Ustjanzew, et al. · Cancers · 21
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Interaction between Bacteria and the Immune System for Cancer Immunotherapy: The α-GalCer Alliance
2022 · Arsenij Ustjanzew, Valentin Sencio, et al. · International Journal of Molecular Sciences · 19
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Challenges and Experiences Extending the cBioPortal for Cancer Genomics to a Molecular Tumor Board Platform
2021 · Niklas Reimer, Philipp Unberath, et al. · Studies in health technology and informatics · 19
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Creation of a structured molecular genomics report for Germany as a local adaption of HL7’s Genomic Reporting Implementation Guide
2023 · Caroline Stellmach, Julian Sass, et al. · Journal of the American Medical Informatics Association · 16
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Glucosylceramide Synthase Inhibitors Induce Ceramide Accumulation and Sensitize H3K27 Mutant Diffuse Midline Glioma to Irradiation
2023 · Khalifa El Malki, Pia Wehling, et al. · International Journal of Molecular Sciences · 11
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The Chimeric Antigen Receptor T Cell Target Claudin 6 Is a Marker for Early Organ-Specific Epithelial Progenitors and Is Expressed in Some Pediatric Solid Tumor Entities
2025 · Larissa Seidmann, Arthur Wingerter, et al. · Cancers · 9
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Extending cBioPortal for Therapy Recommendation Documentation in Molecular Tumor Boards: Development and Usability Study
2023 · Christopher Renner, Niklas Reimer, et al. · JMIR Medical Informatics · 8
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cbpManager: a web application to streamline the integration of clinical and genomic data in cBioPortal to support the Molecular Tumor Board
2021 · Arsenij Ustjanzew, Alexander Desuki, et al. · BMC Medical Informatics and Decision Making · 7
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Analysis of RBP expression and binding sites identifies PTBP1 as a regulator of CD19 expression in B-ALL
2023 · Nicole Ziegler, Mariela Cortés-López, et al. · OncoImmunology · 6
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Ganglioside Profiling Uncovers Distinct Patterns in High-Risk Neuroblastoma
2025 · Claudia Paret, Arthur Wingerter, et al. · International Journal of Molecular Sciences · 5
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Identifications of Similarity Metrics for Patients With Cancer: Protocol for a Scoping Review
2024 · Iryna Manuilova, Jan Bossenz, et al. · JMIR Research Protocols · 5
Empowering personalized oncology: evolution of digital support and visualization tools for molecular tumor boards
2025 · Cosima Strantz, Dominik Böhm, et al. · BMC Medical Informatics and Decision Making · 4
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i2dash: Creation of Flexible, Interactive, and Web-Based Dashboards for Visualization of Omics Data
2021 · Arsenij Ustjanzew, Jens Preussner, et al. · Genomics Proteomics & Bioinformatics · 4
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Unraveling the glycosphingolipid metabolism by leveraging transcriptome-weighted network analysis on neuroblastic tumors
2024 · Arsenij Ustjanzew, Annekathrin Silvia Nedwed, et al. · Cancer & Metabolism · 3
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Can open source large language models be used for tumor documentation in Germany?—An evaluation on urological doctors’ notes
2025 · Stefan Lenz, Arsenij Ustjanzew, et al. · BioData Mining · 2
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Unlocking Public Catalogues: Instruction-Tuning LLMs for ICD Coding of German Tumor Diagnoses
2025 · Lenz, Stefan, Rosario, Lakisha Ortiz, et al. · arXiv (Cornell University) · 1
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Data Visualization Support for Interdisciplinary Team Treatment Planning in Clinical Oncology: Scoping Review
2025 · Dominik Boehm, Cosima Strantz, et al. · Journal of Medical Internet Research · 1
Uncovering the Understanding of the Concept of Patient Similarity in Cancer Research and Treatment: Scoping Review
2025 · Iryna Manuilova, Jan Bossenz, et al. · Journal of Medical Internet Research · 1
easier: interpretable predictions of antitumor immune response from bulk RNA-seq data
2021 · Óscar Lapuente-Santana, Federico Marini, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 1
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Instruction-tuning large language models with medical classification data improves ICD coding of German tumor diagnoses
2026 · Stefan Lenz, Lakisha Ortiz Rosario, et al. · Scientific Reports
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To RAG, or Not to RAG? A Comparative Evaluation of Retrieval-Augmented Generation for ICD Coding of German Tumor Diagnoses
2026 · Fatma Alickovic, Stefan Lenz, et al. · medRxiv
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Findings from the PM4Onco Workshop on Determining Patient Similarity Search Strategies for Personalized Therapy in Molecular Tumor Boards
2026 · Iryna Manuilova, Annemarie B. Weise, et al. · Studies in health technology and informatics
Exploiting gangliosides for the stratification of neuroblastoma
2026 · C. Paret, A. Wingerter, et al. · EJC Paediatric Oncology
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Additional file 1 of GeDi: simplifying gene set distances for enhanced omics interpretation in R/Bioconductor
2026 · Nedwed, Annekathrin Silvia, Ustjanzew, Arsenij, et al. · Figshare
Works count: 61
Citation count: 173
H-index: 8
I10-index: 6
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