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Artem Babaian
Observed names:
A Babaian,
Artem, Babaian,
Babaian, Artem
Institution:
University of Toronto
Observed institutions:
BC Cancer Agency,
University of British Columbia,
University of Toronto,
University of Cambridge,
Terry Fox Research Institute,
National Research Council,
McMaster University
show all 7
ORCID:
0000-0002-4315-6262
Observed ORCID:
0000-0002-4315-6262
OpenAlex ID:
A5042327671
Petabase-scale sequence alignment catalyses viral discovery
2022
·
Robert C. Edgar
, Brie Taylor
, et al.
·
Nature
·
498
PDF
Endogenous retroviral promoter exaptation in human cancer
2016
·
Artem Babaian
, Dixie L. Mager
·
Mobile DNA
·
247
PDF
Onco-exaptation of an endogenous retroviral LTR drives IRF5 expression in Hodgkin lymphoma
2015
·
A Babaian
, M T Romanish
, et al.
·
Oncogene
·
120
Loss of m1acp3Ψ Ribosomal RNA Modification Is a Major Feature of Cancer
2020
·
Artem Babaian
, Katharina Rothe
, et al.
·
Cell Reports
·
110
PDF
Ribovirus classification by a polymerase barcode sequence
2022
·
Artem Babaian
, Robert C. Edgar
·
PeerJ
·
88
Length of dsRNA (poly I:C) drives distinct innate immune responses, depending on the cell type
2013
·
M Firoz Mian
, Amna N Ahmed
, et al.
·
Journal of Leukocyte Biology
·
85
Hybrids of RNA viruses and viroid-like elements replicate in fungi
2023
·
Marco Forgia
, Beatriz Navarro
, et al.
·
Nature Communications
·
83
Distinct isoform of FABP7 revealed by screening for retroelement-activated genes in diffuse large B-cell lymphoma
2014
·
Frances E. Lock
, Rita Rebollo
, et al.
·
Proceedings of the National Academy of Sciences
·
75
Logan: Planetary-Scale Genome Assembly Surveys Life’s Diversity
2024
·
Rayan Chikhi
, Téo Lemane
, et al.
·
bioRxiv (Cold Spring Harbor Laboratory)
·
74
Viroid-like colonists of human microbiomes
2024
·
Ivan N. Zheludev
, Robert C. Edgar
, et al.
·
Cell
·
73
The miR-185/PAK6 axis predicts therapy response and regulates survival of drug-resistant leukemic stem cells in CML
2020
·
Hanyang Lin
, Katharina Rothe
, et al.
·
Blood
·
53
Integrin-Linked Kinase Mediates Therapeutic Resistance of Quiescent CML Stem Cells to Tyrosine Kinase Inhibitors
2020
·
Katharina Rothe
, Artem Babaian
, et al.
·
Cell stem cell
·
48
PDF
LIONS: analysis suite for detecting and quantifying transposable element initiated transcription from RNA-seq
2019
·
Artem Babaian
, I Richard Thompson
, et al.
·
Bioinformatics
·
34
PDF
A novel isoform of IL-33 revealed by screening for transposable element promoted genes in human colorectal cancer
2017
·
Frances E. Lock
, Artem Babaian
, et al.
·
PLoS ONE
·
23
PDF
Consensus statement from the first RdRp Summit: advancing RNA virus discovery at scale across communities
2024
·
Justine Charon
, Ingrida Olendraite
, et al.
·
Frontiers in Virology
·
19
PDF
ICTV Virus Taxonomy Profile: Kolmioviridae 2024
2024
·
Jens H. Kuhn
, Artem Babaian
, et al.
·
Journal of General Virology
·
18
Petascale Homology Search for Structure Prediction
2023
·
Sewon Lee
, Gyuri Kim
, et al.
·
bioRxiv (Cold Spring Harbor Laboratory)
·
16
PDF
A parasite odyssey: An RNA virus concealed in Toxoplasma gondii
2024
·
Purav Gupta
, Aiden Hiller
, et al.
·
Virus Evolution
·
12
PDF
Synthetic modeling reveals HOXB genes are critical for the initiation and maintenance of human leukemia
2019
·
Manabu Kusakabe
, Ann Chong Sun
, et al.
·
Nature Communications
·
12
PDF
Visualized Computational Predictions of Transcriptional Effects by Intronic Endogenous Retroviruses
2013
·
Ying Zhang
, Artem Babaian
, et al.
·
PLoS ONE
·
12
PDF
Intra- and Inter-individual genetic variation in human ribosomal RNAs
2017
·
Artem Babaian
·
bioRxiv (Cold Spring Harbor Laboratory)
·
10
PDF
Metatranscriptomic analysis uncovers prevalent viral ORFs compatible with mitochondrial translation
2023
·
Adam Begeman
, Artem Babaian
, et al.
·
mSystems
·
9
Discovery of functional factorless internal ribosome entry site-like structures through virome mining
2025
·
Subash Chapagain
, Nicolas Salcedo-Porras
, et al.
·
PLoS Pathogens
·
7
PDF
Petabase-Scale Homology Search for Structure Prediction
2024
·
Sewon Lee
, Gyuri Kim
, et al.
·
Cold Spring Harbor Perspectives in Biology
·
7
bioSyntax: syntax highlighting for computational biology
2018
·
Artem Babaian
, Anicet Ebou
, et al.
·
BMC Bioinformatics
·
5
PDF
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Works count:
54
Citation count:
1,751
H-index:
16
I10-index:
21
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