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Anna Paola Carrieri
Observed names:
Anna-Paola Carrieri,
Anna‐Paola Carrieri,
Carrieri, Anna Paola
Institution:
Sci-Tech Daresbury
Observed institutions:
Science and Technology Facilities Council,
Daresbury Laboratory,
IBM Research - Almaden,
Sci-Tech Daresbury,
IBM Research - United Kingdom,
IBM (United Kingdom),
University of Milano-Bicocca
show all 7
ORCID:
0000-0003-2349-1896
Observed ORCID:
0000-0003-2349-1896
OpenAlex ID:
A5043161270
Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity
2022
·
Justin P. Shaffer
, Louis-Félix Nothias
, et al.
·
Nature Microbiology
·
233
PDF
Human Skin, Oral, and Gut Microbiomes Predict Chronological Age
2020
·
Shi Huang
, Niina Haiminen
, et al.
·
mSystems
·
171
PDF
Challenges in benchmarking metagenomic profilers
2021
·
Zheng Sun
, Shi Huang
, et al.
·
Nature Methods
·
141
PDF
Explainable AI reveals changes in skin microbiome composition linked to phenotypic differences
2021
·
Anna Paola Carrieri
, Niina Haiminen
, et al.
·
Scientific Reports
·
98
PDF
SARS-CoV-2 detection status associates with bacterial community composition in patients and the hospital environment
2021
·
Clarisse Marotz
, Pedro Belda-Ferre
, et al.
·
Microbiome
·
77
PDF
Efficient computation of Faith's phylogenetic diversity with applications in characterizing microbiomes
2021
·
George Armstrong
, Kalen Cantrell
, et al.
·
Genome Research
·
54
PDF
EMPress Enables Tree-Guided, Interactive, and Exploratory Analyses of Multi-omic Data Sets
2021
·
Kalen Cantrell
, Marcus W. Fedarko
, et al.
·
mSystems
·
53
Explaining evolution via constrained persistent perfect phylogeny
2014
·
Paola Bonizzoni
, Anna Paola Carrieri
, et al.
·
BMC Genomics
·
51
PDF
Combining explainable machine learning, demographic and multi-omic data to inform precision medicine strategies for inflammatory bowel disease
2022
·
Laura-Jayne Gardiner
, Anna Paola Carrieri
, et al.
·
PLoS ONE
·
43
PDF
Using human in vitro transcriptome analysis to build trustworthy machine learning models for prediction of animal drug toxicity
2020
·
Laura-Jayne Gardiner
, Anna Paola Carrieri
, et al.
·
Scientific Reports
·
34
PDF
Algorithms for the Constrained Perfect Phylogeny with Persistent Characters
2014
·
Bonizzoni, Paola
, Carrieri, Anna Paola
, et al.
·
arXiv (Cornell University)
·
32
PDF
Interpreting machine learning models to investigate circadian regulation and facilitate exploration of clock function
2021
·
Laura-Jayne Gardiner
, Rachel Rusholme-Pilcher
, et al.
·
Proceedings of the National Academy of Sciences
·
29
PDF
AutoXAI4Omics: an automated explainable AI tool for omics and tabular data
2024
·
James Strudwick
, Laura-Jayne Gardiner
, et al.
·
Briefings in Bioinformatics
·
26
PDF
Utilizing stability criteria in choosing feature selection methods yields reproducible results in microbiome data
2021
·
Lingjing Jiang
, Niina Haiminen
, et al.
·
Biometrics
·
26
Streaming histogram sketching for rapid microbiome analytics
2019
·
Will P. M. Rowe
, Anna Paola Carrieri
, et al.
·
Microbiome
·
23
PDF
Development and evaluation of statistical and artificial intelligence approaches with microbial shotgun metagenomics data as an untargeted screening tool for use in food production
2024
·
Kristen L. Beck
, Niina Haiminen
, et al.
·
mSystems
·
19
A colored graph approach to perfect phylogeny with persistent characters
2016
·
Paola Bonizzoni
, Anna Paola Carrieri
, et al.
·
Theoretical Computer Science
·
15
Accelerating molecular discovery through data and physical sciences: Applications to peptide-membrane interactions
2018
·
Flaviu Cipcigan
, Anna Paola Carrieri
, et al.
·
The Journal of Chemical Physics
·
13
When and How the Perfect Phylogeny Model Explains Evolution
2013
·
Paola Bonizzoni
, Anna Paola Carrieri
, et al.
·
Natural computing series
·
12
A Fast Machine Learning Workflow for Rapid Phenotype Prediction from Whole Shotgun Metagenomes
2019
·
Anna Paola Carrieri
, Will PM Rowe
, et al.
·
Proceedings of the AAAI Conference on Artificial Intelligence
·
11
Topological Signatures for Population Admixture
2015
·
Laxmi Parida
, Filippo Utro
, et al.
·
Lecture notes in computer science
·
11
DGCNN approach links metagenome-derived taxon and functional information providing insight into global soil organic carbon
2024
·
Laura-Jayne Gardiner
, Matthew Marshall
, et al.
·
npj Biofilms and Microbiomes
·
8
Host Phenotype Prediction from Differentially Abundant Microbes Using RoDEO
2017
·
Anna Paola Carrieri
, Niina Haiminen
, et al.
·
Lecture notes in computer science
·
7
Sampling ARG of multiple populations under complex configurations of subdivision and admixture
2015
·
Anna Paola Carrieri
, Filippo Utro
, et al.
·
Bioinformatics
·
4
PDF
RNA foundation models enable generalizable endometriosis disease classification and stable gene-level interpretation
2026
·
Niccolo McConnell
, Jennifer Kelly
, et al.
·
bioRxiv (Cold Spring Harbor Laboratory)
·
1
PDF
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Works count:
33
Citation count:
1,192
H-index:
16
I10-index:
21
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