Author

Jiazhen Rong

Observed names: Jiazhen (JoJo) Rong, Rong, Jiazhen

Institution: University of Pennsylvania

Observed institutions: Harvard University, University of Pennsylvania

ORCID: 0000-0002-7884-5973

Observed ORCID: 0000-0002-7884-5973

OpenAlex ID: A5043395820

Unsupervised and supervised discovery of tissue cellular neighborhoods from cell phenotypes

2024 · Yuxuan Hu, Jiazhen Rong, et al. · Nature Methods · 93

Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

2024 · Kaishu Mason, Anuja Sathe, et al. · Genome biology · 55

Clonal cell states link gastroesophageal junction tissues with metaplasia and cancer

2025 · Rodrigo A. Gier, Sydney A. Bracht, et al. · Nature Communications · 16

Cancer subclone detection based on DNA copy number in single-cell and spatial omic sequencing data

2025 · Chi-Yun Wu, Jiazhen Rong, et al. · Nature Methods · 15

A longitudinal single-cell and spatial multiomic atlas of pediatric high-grade glioma

2026 · Jonathan H. Sussman, Derek A. Oldridge, et al. · Cell Reports Medicine · 11

Bedtk: finding interval overlap with implicit interval tree

2020 · Heng Li, Jiazhen Rong · Bioinformatics · 11

Mitochondrial clone tracing within spatially intact human tissues

2025 · Sydney A. Bracht, Jiazhen Rong, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 6

ntsm: an alignment-free, ultra-low-coverage, sequencing technology agnostic, intraspecies sample comparison tool for sample swap detection

2024 · Justin Chu, Jiazhen Rong, et al. · GigaScience · 5

Effector Vδ1 γδT cells mediate anti-tumor immunity and are reprogrammed by imatinib in human gastrointestinal stromal tumor

2026 · Ronald DeMatteo, SHAN ZENG, et al. · Research Square

Additional file 1 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

2024 · Mason, Kaishu, Sathe, Anuja, et al. · Figshare

Abstract 5042: Reconstructing the spatial evolution of cancer through subclone detection on copy number profiles in tumor sequencing data

2022 · Chi-Yun Wu, Paul R. Hess, et al. · Cancer Research

Works count: 25

Citation count: 214

H-index: 6

I10-index: 6