Get started
Author

Matt Jeffryes

Observed names: Jeffryes, Matt, Jeffryes, Matthew, Jeffryes, Matthew Jacob, Matthew Jacob Jeffryes
ORCID: 0000-0001-9868-6271
Observed ORCID: 0000-0001-9868-6271
OpenAlex ID: A5044646838
The HMMER Web Server for Protein Sequence Similarity Search
2017 · Ananth Prakash, Matt Jeffryes, et al. · Current Protocols in Bioinformatics · 212
Europe PMC in 2023
2023 · Summer Rosonovski, Maria Levchenko, et al. · Nucleic Acids Research · 31
PDF
Expression Atlas in 2026: enabling FAIR and open expression data through community collaboration and integration
2025 · Pedro Madrigal, Anil S Thanki, et al. · Nucleic Acids Research · 20
PDF
Empowering biological knowledgebases: advances in human-in-the-loop AI-driven literature curation
2026 · Valerie Wood, Matt Jeffryes, et al. · Bioinformatics Advances · 10
Gene Unprediction with Spurio: A tool to identify spurious protein sequences
2018 · Wolfram Höps, Matt Jeffryes, et al. · F1000Research · 10
Rapid identification of novel protein families using similarity searches
2018 · Matt Jeffryes, Alex Bateman · F1000Research · 3
Crowdsourcing Protein Family Database Curation.
2016 · Matt Jeffryes, Maria Liakata, et al. · 3
CeLLaTe: a gold standard text mining dataset for Cell Types, Cell Lines, and Tissues
2026 · Christine Ann Withers, Ray Stefancsik, et al.
CeLLaTe
2026 · Withers, Christine Ann, Stefancsik, Ray, et al. · Zenodo (CERN European Organization for Nuclear Research)
Engaging the scientific community in high-quality biocuration: a report on the International Society for Biocuration workshop, 'Maximizing community curation for the benefit of all'
2026 · Raciti, Daniela, Coort, Susan L. M., et al. · arXiv (Cornell University)
PDF
EMBL AI Librarian: Life-Sciences Knowledge Layer for AI Agents
2026 · Sigillo, Luigi, Silvestri, Matteo, et al. · arXiv (Cornell University)
PDF
DOME Copilot: A resource to automate transparent reporting of artificial intelligence methods
2026 · Gavin Farrell, Omar Abdelghani Attafi, et al. · bioRxiv (Cold Spring Harbor Laboratory)
PDF
AI in Biocuration: Challenges, Opportunities, and a Roadmap for Sustainable Integration
2026 · Arnaboldi, Valerio, Schriml, Lynn, et al. · Zenodo (CERN European Organization for Nuclear Research)
AI in biocuration: challenges, opportunities, and a roadmap for sustainable integration
2026 · Valerio Arnaboldi, Lynn M Schriml, et al. · Bioinformatics Advances
Dataset Publication Standards: Community Lessons from a Multi-Stakeholder Workshop on FAIR Implementation
2026 · Julien Gobeill, Matt Jeffryes, et al. · Data Science Journal
PDF
LitSieve: An integrated literature search and triage tool for biocuration
2025 · Matt Jeffryes, Melissa Harrison, et al. · F1000Research
PDF
SIB Text Mining at TREC 2020 Deep Learning Track.
2020 · Julien Knafou, Matthew Jacob Jeffryes, et al. · ArODES (HES-SO (https://www.hes-so.ch/))
PDF
SIB Text Mining at TREC 2019 Deep Learning Track: Working Note.
2019 · Julien Knafou, Matt Jeffryes, et al. · Archive ouverte UNIGE (University of Geneva)
Community Classification of the Protein Universe
2018 · Jeffryes, Matthew Jacob · Apollo (University of Cambridge)
PDF
Works count: 20
Citation count: 290
H-index: 5
I10-index: 5
Year
Topic
Type