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Soobok Joe

Microbiome preterm birth DREAM challenge: Crowdsourcing machine learning approaches to advance preterm birth research
2023 · Jonathan L. Golob, Tomiko T. Oskotsky, et al. · Cell Reports Medicine · 53
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Comparison of structural variant callers for massive whole-genome sequence data
2024 · Soobok Joe, Jong-Lyul Park, et al. · BMC Genomics · 35
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Development of Tissue-Specific Age Predictors Using DNA Methylation Data
2019 · Heeyeon Choi, Soobok Joe, et al. · Genes · 28
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Highly accurate Korean draft genomes reveal structural variation highlighting human telomere evolution
2025 · Jun Kim, Jong Lyul Park, et al. · Nucleic Acids Research · 14
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Prognostic factor analysis for breast cancer using gene expression profiles
2016 · Soobok Joe, Hojung Nam · BMC Medical Informatics and Decision Making · 14
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Deciphering the DNA methylation landscape of colorectal cancer in a Korean cohort
2023 · Seok-Byung Lim, Soobok Joe, et al. · BMB Reports · 5
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Epigenetic insights into colorectal cancer: comprehensive genome-wide DNA methylation profiling of 294 patients in Korea
2023 · Soobok Joe, Jinyong Kim, et al. · BMB Reports · 4
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Prediction model construction of mouse stem cell pluripotency using CpG and non-CpG DNA methylation markers
2020 · Soobok Joe, Hojung Nam · BMC Bioinformatics · 4
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10,239 whole genomes with multiomic and clinical health information as the Korean Multiomics Reference dataset
2025 · Kyungwhan An, Sungwon Jeon, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 3
Telomere-to-Telomere Accurate and Gapless Korean Standard Reference Genome
2025 · Jihun Bhak, Yoonsung Kwon, et al. · Preprints.org · 3
Prognostic Factor Analysis for Breast Cancer Using Gene Expression Profiles
2015 · Soobok Joe, Hojung Nam · Data and Text Mining in Bioinformatics · 3
Exploring the DNA methylome of Korean patients with colorectal cancer consolidates the clinical implications of cancer-associated methylation markers
2024 · Sejoon Lee, Kil-yong Lee, et al. · BMB Reports · 2
Comprehensive profiling of DNA methylation in Korean patients with colorectal cancer
2024 · Hyeran Shim, Kiwon Jang, et al. · BMB Reports · 1
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Identification of a Specific Base Sequence of Pathogenic E. Coli through a Genomic Analysis
2014 · Soobok Joe, Hojung Nam · Data and Text Mining in Bioinformatics · 1
A Korean pangenome reference of 14 healthy individuals supports structural variant analysis in disease genomes
2026 · Dong-Hyun Shin, Jongbum Jeon, et al. · medRxiv
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ONT-only genome assembly of a Korean male individual using a semen sample
2026 · Jian Lee, Ji-Hwan Park, et al. · Genes & Genomics
Immune phenotype-based stratification of colorectal cancer reveals subtype-specific immunotherapeutic opportunities: insights from a Korean patient cohort.
2026 · Jinseon Yoo, Jinyong Kim, et al. · PubMed
Large Language Model as a Promising Framework for the Complete Clinical Interpretation of Human Genetic Variants
2026 · Jihun Bhak, Dong-Hyun Shin, et al. · Preprints.org
Korea10K: 10,239 whole genomes with multiomic and clinical health information as the Korean multiomics reference dataset
2026 · Kyungwhan An, Sungwon Jeon, et al. · Research Square
Abstract LB172: RNA-seq-based molecular and microenvironmental stratification of colorectal cancer in a Korean real-world cohort
2026 · Jinseon Yoo, Kyu Jin Song, et al. · Cancer Research
Abstract 1499: Pangenome-based somatic mutation landscape of early- and late-onset colorectal cancer in 99 Korean patients
2026 · Jae-Yoon Kim, Soobok Joe, et al. · Cancer Research
Microbiome preterm birth DREAM challenge: Crowdsourcing machine learning approaches to advance preterm birth research
2025 · Jonathan L. Golob, Tomiko T. Oskotsky, et al. · Cell Reports Medicine
Genetic variations and recurrence in stage III Korean colorectal cancer: Insights from tumor-only mutation analysis
2025 · Hajin Jeon, Jong Lyul Lee, et al. · PLoS ONE
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KTED: a comprehensive web-based database for transposable elements in the Korean genome
2024 · Jin-Ok Lee, Sejoon Lee, et al. · Bioinformatics Advances
Additional file 1: of Prognostic factor analysis for breast cancer using gene expression profiles
2016 · Joe, Soobok, Nam, Hojung · Figshare
Works count: 30
Citation count: 170
H-index: 5
I10-index: 5
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