Get started
Author

Abubaker Patan

Observed names: PATAN, ABUBAKER, Patan A, Patan, Abubaker
ORCID: 0000-0003-1415-7829
Observed ORCID: 0000-0003-1415-7829
OpenAlex ID: A5046351795
The microbiome diversifies long- to short-chain fatty acid-derived N-acyl lipids
2025 · Helena Mannochio-Russo, Vincent Charron-Lamoureux, et al. · Cell · 51
A guide to reverse metabolomics—a framework for big data discovery strategy
2025 · Vincent Charron-Lamoureux, Helena Mannochio-Russo, et al. · Nature Protocols · 34
PDF
Recent Applications and Evaluation of Metal Nanoparticle–Polymer Hybrids as Chronic Wound Dressings
2024 · Mohammad Tahir Aminzai, Abubaker Patan · Journal of Nanomaterials · 29
PDF
A multi-organ metabolomics atlas reveals molecular dysregulations in Alzheimer’s disease mouse models
2026 · Simone Zuffa, Celeste Allaband, et al. · Cell Reports · 19
Microbiome-derived bile acid signatures in early life and their association with islet autoimmunity
2025 · Santosh Lamichhane, Alex M. Dickens, et al. · Nature Communications · 18
PDF
Ordering molecular diversity in untargeted metabolomics via molecular community networking
2026 · Elizabeth A. Coler, Alexey Melnik, et al. · Cell Reports Methods · 17
Bridging complexity and accessibility in metabolomics with MetaboApps
2026 · Helena Mannochio-Russo, Wilhan D. Gonçalves Nunes, et al. · Nature Methods · 14
PDF
ChemEmbed: a deep learning framework for metabolite identification using enhanced MS/MS data and multidimensional molecular embeddings
2026 · Muhammad Faizan-Khan, Roger Giné, et al. · Briefings in Bioinformatics · 14
PDF
MS/MS Mass Spectrometry Filtering Tree for Bile Acid Regio- and Stereoisomer Annotation
2026 · Ipsita Mohanty, Shipei Xing, et al. · Analytical Chemistry · 13
Charting the undiscovered metabolome with synthetic multiplexing implicates ibuprofen-carnitine in myotoxicity
2025 · Abubaker Patan, Shipei Xing, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 12
Structure-centric searching enables global mapping of the public metabolome
2026 · Yasin El Abiead, Jeong In Seo, et al. · Nature Biotechnology · 10
PDF
Environmental and maternal imprints on infant gut metabolic development
2025 · Kine Eide Kvitne, Celeste Allaband, et al. · Cell Host & Microbe · 9
PDF
A searchable metadata network graph for microbiome metabolomics
2026 · Vincent Charron-Lamoureux, Shipei Xing, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 8
PDF
Fecal microbial and metabolic signatures in children with very early onset inflammatory bowel disease
2025 · Kine Eide Kvitne, Simone Zuffa, et al. · npj Biofilms and Microbiomes · 7
PDF
Community Curation of Microbial Metabolites Enables Biological Insights of Metabolomics Data
2026 · Helena Mannochio-Russo, Wilhan D. Goncalves Nunes, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 5
PDF
Perinatal ampicillin exposure alters murine maternal fecal bile acid and acylcarnitine profiles
2026 · Simone Zuffa, Sydney P. Thomas, et al. · Gut Microbes · 4
PDF
Agentic AI for Structural Elucidation and Discovery of Drug Metabolites from Mass Spectrometry Data
2026 · Xianghu Wang, Abubaker Patan, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 4
PDF
Pan-repository analysis reveals a drug-activating function of microbial bile acid conjugation
2026 · Vincent Charron-Lamoureux, Patricia Kelly, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 4
Navigating the conjugated metabolome
2026 · Shipei Xing, Abubaker Patan, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 4
Pan-Metabolomics Repository Mapping of the Carnitine Landscape
2026 · Helena Mannochio-Russo, Patrick C. Ferreira, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 3
Alkamines reveal a hidden layer of steroid and drug metabolism
2026 · Julius Agongo, Subhaskar R Panga, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 1
Unlocking the bile acid universe: advanced workflows and a multidimensional library of 280 unique species
2026 · Guozhi Zhang, Emily C Vincent, et al. · Sustainable Microbiology · 1
PDF
Reactions of 2,3-dichloro-1,4-naphthoquinone with piperidine, amine and some thiol nucleophile
2021 · Abubaker Patan, F. Serpil Göksel, et al. · Phosphorus, sulfur, and silicon and the related elements · 1
Agentic AI for Structural Elucidation and Discovery of Drug Metabolites from Mass Spectrometry Data - Agentic Bundel
2026 · Wang, Xianghu, Patan, Abubaker, et al. · Zenodo (CERN European Organization for Nuclear Research)
Agentic AI for Structural Elucidation and Discovery of Drug Metabolites from Mass Spectrometry Data
2026 · PATAN, ABUBAKER · Zenodo (CERN European Organization for Nuclear Research)
Works count: 33
Citation count: 282
H-index: 10
I10-index: 11
Year
Topic
Type