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Chiara Damiani

Observed names: C. DAMIANI, C. Damiani, Damiani Chiara, Damiani, C, Damiani, Chiara, Damiani,C
ORCID: 0000-0002-5742-8302
Observed ORCID: 0000-0002-5742-8302
OpenAlex ID: A5049497722
Integration of single-cell RNA-seq data into population models to characterize cancer metabolism
2019 · Chiara Damiani, Davide Maspero, et al. · PLoS Computational Biology · 122
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INTEGRATE: Model-based multi-omics data integration to characterize multi-level metabolic regulation
2022 · Marzia Di Filippo, Dario Pescini, et al. · PLoS Computational Biology · 88
Dynamical Properties of a Boolean Model of Gene Regulatory Network with Memory
2011 · Alex Graudenzi, Roberto Serra, et al. · Journal of Computational Biology · 79
Systems metabolomics: from metabolomic snapshots to design principles
2020 · Chiara Damiani, Daniela Gaglio, et al. · Current Opinion in Biotechnology · 71
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Computational Strategies for a System-Level Understanding of Metabolism
2014 · Paolo Cazzaniga, Chiara Damiani, et al. · Metabolites · 56
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Cell–cell interaction and diversity of emergent behaviours
2011 · C. Damiani, R. Serra, et al. · IET Systems Biology · 53
Perspectives on computational modeling of biological systems and the significance of the SysMod community
2024 · Bhanwar Lal Puniya, Meghna Verma, et al. · Bioinformatics Advances · 52
GPRuler: Metabolic gene-protein-reaction rules automatic reconstruction
2021 · Marzia Di Filippo, Chiara Damiani, et al. · PLoS Computational Biology · 33
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popFBA: tackling intratumour heterogeneity with Flux Balance Analysis
2017 · Chiara Damiani, Marzia Di Filippo, et al. · Bioinformatics · 32
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Zooming-in on cancer metabolic rewiring with tissue specific constraint-based models
2016 · Marzia Di Filippo, Riccardo Colombo, et al. · Computational Biology and Chemistry · 32
Growth and Division in a Dynamic Protocell Model
2014 · Marco Villani, Alessandro Filisetti, et al. · Life · 29
Parameter sensitivity analysis of stochastic models: Application to catalytic reaction networks
2012 · Chiara Damiani, Alessandro Filisetti, et al. · Computational Biology and Chemistry · 21
A stochastic model of catalytic reaction networks in protocells
2014 · Roberto Serra, Alessandro Filisetti, et al. · Natural Computing · 19
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CABeRNET: a Cytoscape app for augmented Boolean models of gene regulatory NETworks
2016 · Andrea Paroni, Alex Graudenzi, et al. · BMC Bioinformatics · 18
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The Diffusion of Perturbations in a Model of Coupled Random Boolean Networks
2008 · Roberto Serra, Marco Villani, et al. · Lecture notes in computer science · 18
Information Transfer among Coupled Random Boolean Networks
2010 · Chiara Damiani, Stuart A. Kauffman, et al. · Lecture notes in computer science · 17
Unity is strength: Improving the detection of adversarial examples with ensemble approaches
2023 · Francesco Craighero, Fabrizio Angaroni, et al. · Neurocomputing · 16
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Combining denoising of RNA-seq data and flux balance analysis for cluster analysis of single cells
2022 · Bruno G. Galuzzi, Marco Vanoni, et al. · BMC Bioinformatics · 15
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Divergent in vitro/in vivo responses to drug treatments of highly aggressive NIH-Ras cancer cells: a PET imaging and metabolomics-mass-spectrometry study
2016 · Daniela Gaglio, Silvia Valtorta, et al. · Oncotarget · 15
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An ensemble evolutionary constraint-based approach to understand the emergence of metabolic phenotypes
2014 · Chiara Damiani, Dario Pescini, et al. · Natural Computing · 15
On RAF Sets and Autocatalytic Cycles in Random Reaction Networks
2014 · Alessandro Filisetti, Marco Villani, et al. · Communications in computer and information science · 15
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Dynamical regimes in non-ergodic random Boolean networks
2016 · Marco Villani, Davide Campioli, et al. · Natural Computing · 14
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Accelerated global sensitivity analysis of genome-wide constraint-based metabolic models
2021 · Marco S. Nobile, Vasco Coelho, et al. · BMC Bioinformatics · 10
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Adjusting for false discoveries in constraint-based differential metabolic flux analysis
2024 · Bruno G. Galuzzi, Luca Milazzo, et al. · Journal of Biomedical Informatics · 9
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Linking Alterations in Metabolic Fluxes with Shifts in Metabolite Levels by Means of Kinetic Modeling
2017 · Chiara Damiani, Riccardo Colombo, et al. · Communications in computer and information science · 7
Works count: 71
Citation count: 902
H-index: 16
I10-index: 23
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