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Matthias Lieber

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
2013 · Brian J Haas, Alexie Papanicolaou, et al. · Nature Protocols · 8,555
The Vampir Performance Analysis Tool-Set
2008 · Andreas Knüpfer, Holger Brunst, et al. · Springer eBooks · 378
Developing Scalable Applications with Vampir, VampirServer and VampirTrace
2007 · Matthias Müller, Andreas Knüpfer, et al. · 100
Trinity RNA-Seq assembler performance optimization
2012 · Robert Henschel, Matthias Lieber, et al. · Extreme Science and Engineering Discovery Environment · 90
A Hardware/Software Stack for Heterogeneous Systems
2017 · Jeronimo Castrillon, Jochen Frohlich, et al. · IEEE Transactions on Multi-Scale Computing Systems · 22
Highly scalable SFC-based dynamic load balancing and its application to atmospheric modeling
2017 · Matthias Lieber, Wolfgang E. Nagel · Future Generation Computer Systems · 20
Highly Scalable Dynamic Load Balancing in the Atmospheric Modeling System COSMO-SPECS+FD4
2012 · Matthias Lieber, Verena Grützun, et al. · Lecture notes in computer science · 19
Optimizing the coupling in parallel air quality model systems
2007 · Matthias Lieber, Ralf Wolke · Environmental Modelling & Software · 19
The Potential of Diffusive Load Balancing at Large Scale
2016 · Matthias Lieber, Kerstin Gößner, et al. · European MPI Users' Group Meeting (EuroMPI) · 14
FFMK: A Fast and Fault-Tolerant Microkernel-Based System for Exascale Computing
2016 · Carsten Weinhold, Adam Lackorzynski, et al. · Lecture notes in computational science and engineering · 10
Resilient gossip algorithms for collecting online management information in exascale clusters
2015 · Amnon Barak, Zvi Drezner, et al. · Concurrency and Computation Practice and Experience · 10
Towards Computational Performance Engineering for Unsupervised Concept Drift Detection: Complexities, Benchmarking, Performance Analysis
2024 · Elias Werner, Nishant Kumar, et al. · International Conference on Data Science, Technology and Applications (DATA) · 8
Scalable high-quality 1D partitioning
2014 · Matthias Lieber, Wolfgang E. Nagel · International Conference on High Performance Computing & Simulation (HPCS) · 7
Overhead of a decentralized gossip algorithm on the performance of HPC applications
2014 · Ely Levy, Amnon Barak, et al. · International Workshop on Runtime and Operating Systems for Supercomputers · 6
Seamless transitions: a comprehensive review of live migration technologies
2026 · Sima Attar-Khorasani, Lincoln Sherpa, et al. · Journal of Cloud Computing Advances Systems and Applications · 5
Load Balancing for CPU-GPU Coupling in Computational Fluid Dynamics
2018 · Immo Huismann, Matthias Lieber, et al. · Lecture notes in computer science · 5
FD4: A Framework for Highly Scalable Load Balancing and Coupling of Multiphase Models
2010 · Matthias Lieber, Verena Grützun, et al. · AIP conference proceedings · 4
Implementation, performance, and science results from a 30.7 TFLOPS IBM BladeCenter cluster
2009 · Craig A. Stewart, Matthew Link, et al. · Concurrency and Computation Practice and Experience · 4
FFMK: A Fast and Fault-Tolerant Microkernel-Based System for Exascale Computing
2020 · Carsten Weinhold, Adam Lackorzynski, et al. · Lecture notes in computational science and engineering · 3
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A framework for detailed multiphase cloud modeling on HPC systems
2010 · Lieber Matthias, Wolke Ralf, et al. · Advances in parallel computing · 3
Modelling of Atmospheric Chemistry Transport Processes
2006 · Ralf Wolke, Matthias Lieber, et al. · 3
Jupyter4NFDI - Proposal for the Integration Phase of Base4NFDI
2025 · Hagemeier, Björn, Bleier, Arnim, et al. · Zenodo (CERN European Organization for Nuclear Research) · 2
Network shape intelligence outperforms AlphaFold2 intelligence in vanilla protein interaction prediction
2023 · Ilyes Abdelhamid, Alessandro Muscoloni, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2
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Dynamische Lastbalancierung und Modellkopplung zur hochskalierbaren Simulation von Wolkenprozessen
2012 · Matthias Lieber · Qucosa (Saxon State and University Library Dresden) · 2
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RASER: Resilient Agent Scheduling and Execution Runtime for HPC Clusters
2026 · Attar-Khorasani, Sima, Lieber, Matthias, et al. · arXiv (Cornell University) · 1
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Works count: 40
Citation count: 9,300
H-index: 10
I10-index: 11
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