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Peter Kubiniok

PTEN Deficiency and AMPK Activation Promote Nutrient Scavenging and Anabolism in Prostate Cancer Cells
2018 · Seong M. Kim, Tricia T. Nguyen, et al. · Cancer Discovery · 200
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The Human Immunopeptidome Project: A Roadmap to Predict and Treat Immune Diseases
2019 · Juan Antonio Vizcaíno, Peter Kubiniok, et al. · Molecular & Cellular Proteomics · 93
Phosphoproteome dynamics of Saccharomyces cerevisiae under heat shock and cold stress
2015 · Evgeny Kanshin, Peter Kubiniok, et al. · Molecular Systems Biology · 60
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Understanding the constitutive presentation of MHC class I immunopeptidomes in primary tissues
2022 · Peter Kubiniok, Ana Marcu, et al. · iScience · 45
The mutational landscape of SARS-CoV-2 variants diversifies T cell targets in an HLA-supertype-dependent manner
2021 · David J. Hamelin, Dominique Fournelle, et al. · Cell Systems · 35
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Time-resolved Phosphoproteome Analysis of Paradoxical RAF Activation Reveals Novel Targets of ERK
2017 · Peter Kubiniok, Hugo Lavoie, et al. · Molecular & Cellular Proteomics · 31
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MhcVizPipe: A Quality Control Software for Rapid Assessment of Small- to Large-Scale Immunopeptidome Datasets
2021 · Kevin A. Kovalchik, Qing Ma, et al. · Molecular & Cellular Proteomics · 20
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Dynamic Phosphoproteomics Uncovers Signaling Pathways Modulated by Anti-oncogenic Sphingolipid Analogs
2018 · Peter Kubiniok, Brendan T. Finicle, et al. · Molecular & Cellular Proteomics · 17
Machine learning-enhanced immunopeptidomics applied to T-cell epitope discovery for COVID-19 vaccines
2024 · Kevin A. Kovalchik, David J. Hamelin, et al. · Nature Communications · 16
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Identification of PP2A-B55 targets uncovers regulation of emerin during nuclear envelope reassembly in Drosophila
2023 · Virginie Emond-Fraser, Myreille Larouche, et al. · Open Biology · 12
Sphingosine simultaneously inhibits nuclear import and activates PP2A by binding importins and PPP2R1A
2025 · Vaishali Jayashankar, Peter Kubiniok, et al. · The EMBO Journal · 7
Immunopeptidomics for Dummies: Detailed Experimental Protocols and Rapid, User-Friendly Visualization of MHC I and II Ligand Datasets with MhcVizPipe
2020 · Kevin A. Kovalchik, Laura Wessling, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 6
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RHybridFinder: An R package to process immunopeptidomic data for putative hybrid peptide discovery
2021 · Frederic Saab, David J. Hamelin, et al. · STAR Protocols · 5
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SysQuan Database: A Community Resource for System-Wide Absolute Quantitation of the Human Proteome
2026 · Peter Kubiniok, Timon Geib, et al. · Journal of Proteome Research
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Studying Mitotic Phosphorylation in Drosophila
2024 · Éric Bonneil, Myreille Larouche, et al. · Methods in molecular biology
Table S3. Quantitative proteomic analysis of Otefin interactors from Drosophila embryos. from Identification of PP2A-B55 targets uncovers regulation of Emerin during nuclear envelope reassembly in Drosophila
2023 · Emond-Fraser, Virginie, Larouche, Myreille, et al. · Figshare
Table S2. Quantitative proteomic analysis of PP2A-Tws dependent phosphosites. from Identification of PP2A-B55 targets uncovers regulation of Emerin during nuclear envelope reassembly in Drosophila
2023 · Emond-Fraser, Virginie, Larouche, Myreille, et al. · Figshare
Table S1. Quantitative proteomic analysis of Tws interactors from Drosophila embryos. from Identification of PP2A-B55 targets uncovers regulation of Emerin during nuclear envelope reassembly in Drosophila
2023 · Emond-Fraser, Virginie, Larouche, Myreille, et al. · Figshare
Identification of Hybrid Peptides in Immunopeptidomic Analyses [R package RHybridFinder version 0.2.0]
2021 · Frederic Saab, Peter Kubiniok
RHybridFinder: Identification of Hybrid Peptides in Immunopeptidomic Analyses
2021 · Frederic Saab, Peter Kubiniok
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Time-Resolved Phosphoproteomics Unravel the Dynamics of Intracellular Signaling
2018 · Kubiniok, Peter · Papyrus : Institutional Repository (Université de Montréal)
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Works count: 30
Citation count: 547
H-index: 10
I10-index: 10
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