Author

Peter Amstutz

Observed names: Amstutz, Peter, P. Amstutz

Observed institutions: University of Massachusetts Amherst, Curoverse (United States), Technology Solutions Experts (United States), Veritas (United States)

ORCID: 0000-0003-3566-7705

Observed ORCID: 0000-0003-3566-7705

OpenAlex ID: A5122314668

Toil enables reproducible, open source, big biomedical data analyses

2017 · John Vivian, Arjun Arkal Rao, et al. · Nature Biotechnology · 1,361

PDF

Common Workflow Language, draft 3

2016 · Amstutz, Peter, Andeer, Robin, et al. · eScholarship (California Digital Library) · 241

Methods included

2022 · Michael R. Crusoe, Sanne Abeln, et al. · Communications of the ACM · 213

PDF

Taking Topic Detection From Evaluation to Practice

2005 · J. Allan, S. Harding, et al. · Hawaii International Conference on System Sciences (HICSS) · 57

Real time visualization of robot state with mobile virtual reality

2003 · P. Amstutz, A.H. Fagg · Proceedings - IEEE International Conference on Robotics and Automation/Proceedings · 16

BioHackathon 2015: Semantics of data for life sciences and reproducible research

2020 · Rutger A. Vos, Toshiaki Katayama, et al. · F1000Research · 5

PDF

Portable, Reproducible Analysis with Arvados

2015 · Peter Amstutz · 4

Reasoning, planning, and goal seeking: a cognitive approach for small combat unit constructive simulation

2012 · Peter Amstutz, Mitha Andra, et al. · 4

Tiling the genome into consistently named subsequences enables precision medicine and machine learning with millions of complex individual data-sets

2015 · Sarah Guthrie, Abram Connelly, et al. · 2

Portable workflow and tool descriptions with the CWL (Common Workflow Language)

2015 · Peter Amstutz, Nebojša Tijanić, et al. · 2

Portable workflow and tool descriptions with the CWL

2015 · Peter Amstutz, Nebojša Tijanić, et al. · Research Explorer (The University of Manchester) · 2

common-workflow-language/cwltool: 3.1.20221109155812

2022 · Michael R. Crusoe, Farah Zaib Khan, et al. · Research Explorer (The University of Manchester) · 1

Using the Common Workflow Language (CWL) to run portable workflows with Arvados and Toil

2016 · Peter Amstutz, Alexander Wait Zaranek, et al. · 1

Discovering Genetic Signatures Associated with Alzheimer’s Disease in Tiled Whole Genome Sequence Data: Results from the Artificial Intelligence for Alzheimer’s Disease (AI4AD) Consortium

2024 · Sarah Wait Zaranek, Alexander Wait Zaranek, et al. · medRxiv

Growing a Diverse and InclusiveWorkflow Ecosystem with CWL

2021 · Zaranek, Sarah, Amstutz, Peter · Zenodo (CERN European Organization for Nuclear Research)

One week to 1000 whole genomes with open source

2018 · Peter Amstutz

Tiling the genome into consistently named subsequences enables precision medicine and machine learning with millions of complex individual data-sets

2015 · Sarah Guthrie, Abram Connelly, et al.

Developing an Arvados BWA-GATK pipeline

2015 · Pjotr Prins, Joep de Ligt, et al.

Reasoning, Planning, and Goal Seeking

2013 · Daniel Rice, Peter Amstutz, et al. · Proceedings of the Human Factors and Ergonomics Society Annual Meeting

Reasoning, Planning, and Goal Seeking for Small Combat Unit Modeling and Simulation

2013 · Daniel Rice, Medhat Korna, et al. · Communications in computer and information science

PDF

Works count: 51

Citation count: 1,945

H-index: 6

I10-index: 6