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Othman Soufan
Observed name:
Soufan, Othman
Institution:
Sulaiman Al Rajhi Colleges
Observed institutions:
King Fahd University of Petroleum and Minerals,
St. Francis Xavier University,
Sulaiman Al Rajhi Colleges,
The Netherlands Cancer Institute,
McGill University,
King Abdullah University of Science and Technology
show all 6
ORCID:
0000-0002-4410-1853
Observed ORCID:
0000-0002-4410-1853
OpenAlex ID:
A5074769323
Works
48
Awards
1
MetaboAnalyst 4.0: towards more transparent and integrative metabolomics analysis
2018
·
Jasmine Chong
, Othman Soufan
, et al.
·
Nucleic Acids Research
·
3,791
PDF
NetworkAnalyst 3.0: a visual analytics platform for comprehensive gene expression profiling and meta-analysis
2019
·
Guangyan Zhou
, Othman Soufan
, et al.
·
Nucleic Acids Research
·
2,037
PDF
miRNet 2.0: network-based visual analytics for miRNA functional analysis and systems biology
2020
·
Le Chang
, Guangyan Zhou
, et al.
·
Nucleic Acids Research
·
959
PDF
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
2019
·
Michael P. Menden
, Dennis Wang
, et al.
·
Nature Communications
·
389
PDF
DWFS: A Wrapper Feature Selection Tool Based on a Parallel Genetic Algorithm
2015
·
Othman Soufan
, Dimitrios Kleftogiannis
, et al.
·
PLoS ONE
·
123
PDF
DASPfind: new efficient method to predict drug–target interactions
2016
·
Wail Ba-alawi
, Othman Soufan
, et al.
·
Journal of Cheminformatics
·
101
PDF
Transcriptome and physiological analysis reveal alterations in muscle metabolisms and immune responses of grass carp (Ctenopharyngodon idellus) cultured at different stocking densities
2019
·
Honghao Zhao
, Othman Soufan
, et al.
·
Aquaculture
·
80
DPubChem: a web tool for QSAR modeling and high-throughput virtual screening
2018
·
Othman Soufan
, Wail Ba-alawi
, et al.
·
Scientific Reports
·
65
PDF
FastBMD: an online tool for rapid benchmark dose–response analysis of transcriptomics data
2020
·
Jessica Ewald
, Othman Soufan
, et al.
·
Bioinformatics
·
49
A novel graph mining approach to predict and evaluate food-drug interactions
2022
·
Md. Mostafizur Rahman
, Srinivas Mukund Vadrev
, et al.
·
Scientific Reports
·
44
PDF
EcoToxModules: Custom Gene Sets to Organize and Analyze Toxicogenomics Data from Ecological Species
2020
·
Jessica D. Ewald
, Othman Soufan
, et al.
·
Environmental Science & Technology
·
36
T1000: a reduced gene set prioritized for toxicogenomic studies
2019
·
Othman Soufan
, Jessica Ewald
, et al.
·
PeerJ
·
34
Development of a Comprehensive Toxicity Pathway Model for 17α-Ethinylestradiol in Early Life Stage Fathead Minnows ( Pimephales promelas )
2021
·
Alper James G. Alcaraz
, David Potěšil
, et al.
·
Environmental Science & Technology
·
27
DRABAL: novel method to mine large high-throughput screening assays using Bayesian active learning
2016
·
Othman Soufan
, Wail Ba-Alawi
, et al.
·
Journal of Cheminformatics
·
27
PDF
Mining Chemical Activity Status from High-Throughput Screening Assays
2015
·
Othman Soufan
, Wail Ba-alawi
, et al.
·
PLoS ONE
·
23
PDF
DANNP: an efficient artificial neural network pruning tool
2017
·
Mona Alshahrani
, Othman Soufan
, et al.
·
PeerJ Computer Science
·
22
EcoToxXplorer: Leveraging Design Thinking to Develop a Standardized Web-Based Transcriptomics Analytics Platform for Diverse Users
2021
·
Othman Soufan
, Jessica Ewald
, et al.
·
Environmental Toxicology and Chemistry
·
19
Systematic selection of chemical fingerprint features improves the Gibbs energy prediction of biochemical reactions
2018
·
Meshari Alazmi
, Hiroyuki Kuwahara
, et al.
·
Bioinformatics
·
17
PDF
Characterizing toxicity pathways of fluoxetine to predict adverse outcomes in adult fathead minnows (Pimephales promelas)
2022
·
Carly Colville
, Alper James Alcaraz
, et al.
·
The Science of The Total Environment
·
11
PDF
Hepatic Transcriptomic Responses to Ethinylestradiol in Two Life Stages of Japanese Quail
2022
·
Yeon-Seon Jeon
, Doug Crump
, et al.
·
Environmental Toxicology and Chemistry
·
7
Arrhythmia Detection using Mutual Information-Based Integration Method
2015
·
Soufan, Othman
, Arafat, Samer
·
arXiv (Cornell University)
·
3
PDF
Metabolomics of diabetes and cardiovascular disease
2023
·
Mahbuba Rahman
, Rizwan Qureshi
, et al.
·
Elsevier eBooks
·
1
T1000: A reduced toxicogenomics gene set for improved decision making
2019
·
Othman Soufan
, Jessica Ewald
, et al.
·
1
Novel Data Mining Methods for Virtual Screening of Biological Active Chemical Compounds
2016
·
Soufan, Othman
·
King Abdullah University of Science and Technology Repository (King Abdullah University of Science and Technology)
·
1
An Empirical Study of Wrappers for Feature Subset Selection based on a Parallel Genetic Algorithm: The Multi-Wrapper Model
2012
·
Soufan, Othman
·
King Abdullah University of Science and Technology Repository (King Abdullah University of Science and Technology)
·
1
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Works count:
48
Citation count:
7,868
H-index:
17
I10-index:
19
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