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Shubhada R. Hegde
Observed names:
Hegde, Shubhada,
S. R. HEGDE,
Shubhada Hegde,
Shubhada R Hegde
Institutions:
Institute of Bioinformatics and Applied Biotechnology,
Chanakya University
Observed institutions:
National Centre for Cell Science,
Institute of Bioinformatics and Applied Biotechnology,
Chanakya University,
Indian Institute of Science Bangalore,
Centre for DNA Fingerprinting and Diagnostics,
Savitribai Phule Pune University
show all 6
ORCID:
0000-0003-2861-4613
Observed ORCID:
0000-0003-2861-4613
OpenAlex ID:
A5079195145
Transcription facilitated genome-wide recruitment of topoisomerase I and DNA gyrase
2017
·
Wareed Ahmed
, Claudia Sala
, et al.
·
PLoS Genetics
·
77
PDF
Dynamic Changes in Protein Functional Linkage Networks Revealed by Integration with Gene Expression Data
2008
·
Shubhada R. Hegde
, Palanisamy Manimaran
, et al.
·
PLoS Computational Biology
·
38
PDF
Computational Identification of the Proteins Associated With Quorum Sensing and Biofilm Formation in Mycobacterium tuberculosis
2020
·
Shubhada R. Hegde
·
Frontiers in Microbiology
·
35
PDF
Understanding Communication Signals during Mycobacterial Latency through Predicted Genome-Wide Protein Interactions and Boolean Modeling
2012
·
Shubhada R. Hegde
, Hannah Rajasingh
, et al.
·
PLoS ONE
·
30
PDF
Prediction of conditional gene essentiality through graph theoretical analysis of genome-wide functional linkages
2009
·
P Manimaran
, Shubhada R Hegde
, et al.
·
Molecular BioSystems
·
27
Genome-wide identification of the context-dependent sRNA expression in Mycobacterium tuberculosis
2020
·
Vimla Kany G. Ami
, Rami Balasubramanian
, et al.
·
BMC Genomics
·
16
PDF
Rho-dependent transcription termination is the dominant mechanism in Mycobacterium tuberculosis
2023
·
Ezaz Ahmad
, Anirban Mitra
, et al.
·
Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms
·
15
In Silico Development of a Multi-Epitope Subunit Vaccine against Bluetongue Virus in Ovis aries Using Immunoinformatics
2024
·
Priyansha Raj Sinha
, Shubhada R. Hegde
, et al.
·
Pathogens
·
10
PDF
Revisiting intrinsic transcription termination in mycobacteria: U-tract downstream of secondary structure is dispensable for termination
2019
·
Ezaz Ahmad
, Shubhada R. Hegde
, et al.
·
Biochemical and Biophysical Research Communications
·
9
PDF
Differential enrichment of regulatory motifs in the composite network of protein-protein and gene regulatory interactions
2014
·
Shubhada R Hegde
, Khushbu Pal
, et al.
·
BMC Systems Biology
·
7
PDF
Loss of correlated proteasomal subunit expression selectively promotes the 20SHigh state which underlies luminal breast tumorigenicity
2025
·
Rangapriya Sundararajan
, Shubhada R. Hegde
, et al.
·
Communications Biology
·
5
PDF
Tumor relevant protein functional interactions identified using bipartite graph analyses
2021
·
Divya Lakshmi Venkatraman
, Deepshika Pulimamidi
, et al.
·
Scientific Reports
·
5
PDF
Ectopic overexpression of Plasmodium falciparum DNA-/RNA-binding Alba proteins misregulates virulence gene homeostasis during asexual blood development
2025
·
Dimple Acharya
, Anitha Nagaraj Bavikatte
, et al.
·
Microbiology Spectrum
·
4
A novel point mutation (L70P) inactivates poliovirus 3C protease
2018
·
M. UMA
, S. R. HEGDE
, et al.
·
Acta Virologica
·
3
PDF
Delineation of key regulatory elements identifies points of vulnerability in the mitogen-activated signaling network
2011
·
Noor Jailkhani
, Srikanth Ravichandran
, et al.
·
Genome Research
·
3
PDF
Identifying Communities in the Virus–Host Protein–Protein Interaction Networks
2025
·
Bhanu Sharma
, Pavitra Kathirvel
, et al.
·
Methods in molecular biology
·
2
Integrating multi-omics data to investigate pseudogene expression in Mycolicibacterium smegmatis
2020
·
Rami Balasubramanian
, Shubhada R. Hegde
·
Gene
·
2
Integrated sequence and -omic features reveal novel small proteome of Mycobacterium tuberculosis
2024
·
Priyansha Raj Sinha
, Rami Balasubramanian
, et al.
·
Frontiers in Microbiology
·
1
Identification of self-consistent modulons from bacterial microarray expression data with the help of structured regulon gene sets
2012
·
Elizaveta A. Permina
, Yulia A. Medvedeva
, et al.
·
Journal of Biomolecular Structure and Dynamics
·
1
Bipartite Graph Analysis of the Virus–Host Protein Interaction Network to Identify Key Proteins Mediating the Infection
2025
·
Surabhi Singh
, Shubhada R. Hegde
·
Methods in molecular biology
Devising Isolation Forest-Based Method to Investigate the sRNAome of Mycobacterium tuberculosis Using sRNA-seq Data
2024
·
Upasana Maity
, Ritika Aggarwal
, et al.
·
Bioinformatics and Biology Insights
Identification of self-consistent modulons from bacterial microarray expression data with the help of structured regulon gene sets
2013
·
Shubhada R. Hegde
, Mande, Shekhar C.
, et al.
·
Figshare
Studies on the structure and dynamics of protein interaction networks
2011
·
Shubhada R. Hegde
·
INFLIBNET
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Works count:
37
Citation count:
290
H-index:
9
I10-index:
8
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