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Amogh Sood

Observed name: Sood, Amogh
ORCID: 0000-0002-4404-3710
Observed ORCID: 0000-0002-4404-3710
OpenAlex ID: A5079495482
Quantifying epigenetic stability with minimum action paths
2020 · Amogh Sood, Bin Zhang · Physical review. E · 11
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Preserving condensate structure and composition by lowering sequence complexity
2024 · Amogh Sood, Bin Zhang · Biophysical Journal · 10
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Dynamical phase transition in models that couple chromatin folding with histone modifications
2024 · Amogh Sood, Greg Schuette, et al. · Physical review. E · 6
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Quantifying the Stability of Coupled Genetic and Epigenetic Switches With Variational Methods
2021 · Amogh Sood, Bin Zhang · Frontiers in Genetics · 6
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Machine-learning force-field scoring rivals free-energy perturbation for congeneric ligand ranking across public benchmarks
2026 · Kevin Ryczko, Sarah Maier, et al. · ChemRxiv · 1
Valency-Limited Molecular Dynamics Simulations of Stickers-and-Spacers Polymers Reveal a Trade-Off between Condensation and Organization
2026 · Yumeng Zhang, Amogh Sood, et al. · The Journal of Physical Chemistry B
Machine-learning force-field scoring rivals free-energy perturbation for congeneric ligand ranking across public benchmarks
2026 · Kevin Ryczko, Sarah Maier, et al. · ChemRxiv
Machine-learning force-field scoring rivals free-energy perturbation for congeneric ligand ranking across public benchmarks
2026 · Kevin Ryczko, Sarah Maier, et al. · ChemRxiv
NEQ ATM Switching for Relative Binding Free Energies
2026 · Pitman, Mary, Sood, Amogh, et al. · Zenodo (CERN European Organization for Nuclear Research)
The Good, The Bad, and The Ugly of Antibody Design: A Roadmap for Integrating Co-folding with Absolute Binding Free Energy Calculations
2026 · Amogh Sood, Punit K. Jha, et al. · ChemRxiv
MAHLER: Integrating Metadynamics and Inverse Folding to Predict Antibody-Antigen Kinetics
2026 · Da Teng, Mary Pitman, et al. · bioRxiv (Cold Spring Harbor Laboratory)
The Good, The Bad, and The Ugly of Antibody Design: A Roadmap for Integrating Co-folding with Absolute Binding Free Energy Calculations
2026 · Jha, Punit, Sood, Amogh, et al. · Zenodo (CERN European Organization for Nuclear Research)
Nonequilibrium Chimeric Switching (NEX) Stabilizes Binding Free Energy Calculations Across Chemical Space
2026 · Mary Pitman, Amogh Sood, et al. · ChemRxiv
Nonequilibrium Chimeric Switching (NEX) Stabilizes Binding Free Energy Calculations Across Chemical Space
2026 · Amogh Sood, Dominic Rufa, et al. · ChemRxiv
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On improving experimental binding affinity predictions with synthetic data
2026 · Kevin Ryczko, Phyo Phyo Zin, et al. · Research Square
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Field theoretic methods applied to epigenetic models
2020 · Amogh Sood, Bin Zhang · Bulletin of the American Physical Society
Works count: 17
Citation count: 34
H-index: 4
I10-index: 2
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