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Aditya S. Deshpande

Observed names: Aditya Deshpande, Aditya S Deshpande, Deshpande, A., Deshpande, Aditya
Observed institutions: The University of Texas MD Anderson Cancer Center, Cornell University, NYU Langone Health, New York Genome Center, Weill Cornell Medicine, NYU Langone’s Laura and Isaac Perlmutter Cancer Center, New York University
ORCID: 0000-0002-4463-2697
Observed ORCID: 0000-0002-4463-2697
OpenAlex ID: A5084043229
Distinct Classes of Complex Structural Variation Uncovered across Thousands of Cancer Genome Graphs
2020 · Kevin Hadi, Xiaotong Yao, et al. · Cell · 269
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Identifying synergistic high-order 3D chromatin conformations from genome-scale nanopore concatemer sequencing
2022 · Aditya S. Deshpande, Netha Ulahannan, et al. · Nature Biotechnology · 157
Ultrasensitive plasma-based monitoring of tumor burden using machine-learning-guided signal enrichment
2024 · Adam J. Widman, Minita Shah, et al. · Nature Medicine · 136
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Integrated mutational landscape analysis of uterine leiomyosarcomas
2021 · Jungmin Choi, Aranzazu Manzano, et al. · Proceedings of the National Academy of Sciences · 123
Nanopore sequencing of DNA concatemers reveals higher-order features of chromatin structure
2019 · Netha Ulahannan, Matthew Pendleton, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 51
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Long-molecule scars of backup DNA repair in BRCA1- and BRCA2-deficient cancers
2023 · Jeremy Setton, Kevin Hadi, et al. · Nature · 48
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Most large structural variants in cancer genomes can be detected without long reads
2023 · Zi-Ning Choo, Julie M. Behr, et al. · Nature Genetics · 42
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Whole-genome characterization of lung adenocarcinomas lacking alterations in the RTK/RAS/RAF pathway
2021 · Jian Carrot-Zhang, Xiaotong Yao, et al. · Cell Reports · 32
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Recurrent somatic mutations as predictors of immunotherapy response
2022 · Zoran Z. Gajic, Aditya Deshpande, et al. · Nature Communications · 30
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Whole-genome characterization of lung adenocarcinomas lacking alterations in the RTK/RAS/RAF pathway
2021 · Jian Carrot-Zhang, Xiaotong Yao, et al. · Cell Reports · 24
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Strategies for identification of somatic variants using the Ion Torrent deep targeted sequencing platform
2018 · Aditya Deshpande, Wenhua Lang, et al. · BMC Bioinformatics · 24
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Assessing inter-component heterogeneity of biphasic uterine carcinosarcomas
2018 · Yihua Liu, Zachary Weber, et al. · Gynecologic Oncology · 17
Novel patterns of complex structural variation revealed across thousands of cancer genome graphs
2019 · Kevin Hadi, Xiaotong Yao, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 14
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Ethnic disparities relative to disease features and outcomes in children with acute myeloid leukemia
2017 · M. Monica Gramatges, Aditya Deshpande, et al. · Pediatric Blood & Cancer · 13
Robust foreground detection in somatic copy number data
2019 · Aditya Deshpande, Trent Walradt, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 12
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Abstract 2149: A whole genome sequencing classifier of homologous recombination deficiency
2023 · Kevin Hadi, Gunes Gundem, et al. · Cancer Research · 8
Pan-cancer immune and stromal deconvolution predicts clinical outcomes and mutation profiles
2025 · Bhavneet Bhinder, Verena Friedl, et al. · Scientific Reports · 6
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Passenger mutations link cellular origin and transcriptional identity in human lung adenocarcinomas
2025 · Sukanya Panja, Padmaja Mantri, et al. · Nature Genetics · 5
Whole genome sequencing elucidates etiological differences in MCPyV-negative Merkel cell carcinoma
2024 · Carla Stephan, Majd Al Assaad, et al. · Pathology - Research and Practice · 3
Whole-genome characterization of lung adenocarcinomas lacking the RTK/RAS/RAF pathway
2021 · Beroukhim, R., Carrot-Zhang, J., et al. · Carolina Digital Repository (University of North Carolina at Chapel Hill) · 3
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Whole genome and transcriptome analysis of pancreatic acinar cell carcinoma elucidates mechanisms of homologous recombination deficiency and unravels novel relevant fusion events
2024 · Jesús Delgado-de la Mora, Majd Al Assaad, et al. · Pathology - Research and Practice · 2
Enhancing the detection of clinically relevant biomarkers in advanced uterine and tubo-ovarian carcinomas through genome-wide analysis
2024 · Majd Al Assaad, Kevin Hadi, et al. · Pathology - Research and Practice · 2
Loose ends in cancer genome structure
2021 · Julie M. Behr, Xiaotong Yao, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2
Abstract 2594: Optimizing the replication of cancer genomics workflows: case studies
2017 · Jerry Fowler, F. Anthony San Lucas, et al. · Cancer Research · 2
Poorer Relapse-Free Survival in Hispanic Children Diagnosed with Acute Myeloid Leukemia Compared with Non-Hispanics: A Texas Single Institution Experience
2015 · Aditya Deshpande, Maria Monica Gramatges, et al. · Blood · 2
Works count: 42
Citation count: 1,029
H-index: 13
I10-index: 15
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