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Stephan Beisken

Observed name: Beisken, Stephan
ORCID: 0000-0002-2412-4118
Observed ORCID: 0000-0002-2412-4118
OpenAlex ID: A5087750652
KNIME-CDK: Workflow-driven cheminformatics
2013 · Stephan Beisken, Thorsten Meinl, et al. · BMC Bioinformatics · 161
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Progressive Development of Cefiderocol Resistance in Escherichia coli During Therapy is Associated With an Increase in blaNDM-5 Copy Number and Gene Expression
2021 · Patricia J Simner, Heba H Mostafa, et al. · Clinical Infectious Diseases · 119
Large-scale assessment of antimicrobial resistance marker databases for genetic phenotype prediction: a systematic review
2020 · Norhan Mahfouz, Inês Ferreira, et al. · Journal of Antimicrobial Chemotherapy · 118
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Cefiderocol Activity Against ClinicalPseudomonas aeruginosaIsolates Exhibiting Ceftolozane-Tazobactam Resistance
2021 · Patricia J Simner, Stephan Beisken, et al. · Open Forum Infectious Diseases · 80
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An NDM-Producing Escherichia coli Clinical Isolate Exhibiting Resistance to Cefiderocol and the Combination of Ceftazidime-Avibactam and Aztreonam: Another Step Toward Pan-β-Lactam Resistance
2023 · Patricia J Simner, Yehudit Bergman, et al. · Open Forum Infectious Diseases · 74
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Modifiable Risk Factors for the Emergence of Ceftolozane-tazobactam Resistance
2020 · Pranita D Tamma, Stephan Beisken, et al. · Clinical Infectious Diseases · 70
Multicenter Evaluation of the Unyvero Platform for Testing Bronchoalveolar Lavage Fluid
2020 · Matthias Klein, Johannes Bacher, et al. · Journal of Clinical Microbiology · 69
Species Identification and Antibiotic Resistance Prediction by Analysis of Whole-Genome Sequence Data by Use of ARESdb: an Analysis of Isolates from the Unyvero Lower Respiratory Tract Infection Trial
2020 · Ines Ferreira, Stephan Beisken, et al. · Journal of Clinical Microbiology · 66
Getting the right answers: understanding metabolomics challenges
2014 · Stephan Beisken, Michael Eiden, et al. · Expert Review of Molecular Diagnostics · 65
Defining Baseline Mechanisms of Cefiderocol Resistance in the Enterobacterales
2021 · Patricia J. Simner, Stephan Beisken, et al. · Microbial Drug Resistance · 61
Rapid nanopore sequencing and predictive susceptibility testing of positive blood cultures from intensive care patients with sepsis
2024 · Patrick N. A. Harris, Michelle J. Bauer, et al. · Microbiology Spectrum · 40
BiNChE: A web tool and library for chemical enrichment analysis based on the ChEBI ontology
2015 · Pablo Moreno, Stephan Beisken, et al. · BMC Bioinformatics · 39
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Combination of phage therapy and cefiderocol to successfully treat Pseudomonas aeruginosa cranial osteomyelitis
2022 · Patricia J. Simner, Jerald Cherian, et al. · JAC-Antimicrobial Resistance · 38
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Learning From Limited Data: Towards Best Practice Techniques for Antimicrobial Resistance Prediction From Whole Genome Sequencing Data
2021 · Lukas Lüftinger, Peter Májek, et al. · Frontiers in Cellular and Infection Microbiology · 38
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Validation and Application of Long-Read Whole-Genome Sequencing for Antimicrobial Resistance Gene Detection and Antimicrobial Susceptibility Testing
2022 · Thomas Weinmaier, Rick Conzemius, et al. · Antimicrobial Agents and Chemotherapy · 36
Genome-Wide Mutation Scoring for Machine-Learning-Based Antimicrobial Resistance Prediction
2021 · Peter Májek, Lukas Lüftinger, et al. · International Journal of Molecular Sciences · 29
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Analytical Performance Validation of Next-Generation Sequencing Based Clinical Microbiology Assays Using a K-mer Analysis Workflow
2020 · Sarah Lepuschitz, Thomas Weinmaier, et al. · Frontiers in Microbiology · 23
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Predictive Antibiotic Susceptibility Testing by Next-Generation Sequencing for Periprosthetic Joint Infections: Potential and Limitations
2021 · Lukas Lüftinger, Ines Ferreira, et al. · Biomedicines · 20
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Metabolic differences in ripening of Solanum lycopersicum ‘Ailsa Craig’ and three monogenic mutants
2014 · Stephan Beisken, Mark Earll, et al. · Scientific Data · 17
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Automated antimicrobial susceptibility testing and antimicrobial resistance genotyping using Illumina and Oxford Nanopore Technologies sequencing data among Enterobacteriaceae
2022 · Rick Conzemius, Yehudit Bergman, et al. · Frontiers in Microbiology · 14
Optimized Method for Bacterial Nucleic Acid Extraction from Positive Blood Culture Broth for Whole-Genome Sequencing, Resistance Phenotype Prediction, and Downstream Molecular Applications
2022 · Michelle J. Bauer, Anna Maria Peri, et al. · Journal of Clinical Microbiology · 13
Genomic and Phenotypic Analysis of Linezolid-Resistant Staphylococcus epidermidis in a Tertiary Hospital in Innsbruck, Austria
2021 · Silke Huber, Miriam A. Knoll, et al. · Microorganisms · 13
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Clinical Resistome Screening of 1,110 Escherichia coli Isolates Efficiently Recovers Diagnostically Relevant Antibiotic Resistance Biomarkers and Potential Novel Resistance Mechanisms
2019 · Carsten Volz, Jonas Ramoni, et al. · Frontiers in Microbiology · 12
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SpeckTackle: JavaScript charts for spectroscopy
2015 · Stephan Beisken, Pablo Conesa, et al. · Journal of Cheminformatics · 12
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MassCascade: Visual Programming for LC‐MS Data Processing in Metabolomics
2014 · Stephan Beisken, Mark Earll, et al. · Molecular Informatics · 12
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Works count: 41
Citation count: 1,309
H-index: 18
I10-index: 27
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