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Zuobai Zhang
Observed names:
Boyu Han,
Zhang Z.,
Zhang, Zuobai,
Zuobai ZHANG
Institutions:
Fudan University,
Nvidia (United States)
Observed institutions:
Fudan University,
Nvidia (United States),
Mila - Quebec Artificial Intelligence Institute,
Université de Montréal
ORCID:
0000-0002-9773-0696
Observed ORCID:
0000-0002-9773-0696
OpenAlex ID:
A5088040716
Neural Bellman-Ford Networks: A General Graph Neural Network Framework for Link Prediction
2021
·
Zhu, Zhaocheng
, Zhang, Zuobai
, et al.
·
arXiv (Cornell University)
·
149
PDF
Protein Representation Learning by Geometric Structure Pretraining
2022
·
Zhang, Zuobai
, Xu, Minghao
, et al.
·
arXiv (Cornell University)
·
102
PDF
Learning interpretable cellular and gene signature embeddings from single-cell transcriptomic data
2021
·
Yifan Zhao
, Huiyu Cai
, et al.
·
Nature Communications
·
90
PDF
PEER: A Comprehensive and Multi-Task Benchmark for Protein Sequence Understanding
2022
·
Minghao Xu
, Zuobai Zhang
, et al.
·
neural information processing systems
·
58
PDF
Pretrainable geometric graph neural network for antibody affinity maturation
2024
·
Huiyu Cai
, Zuobai Zhang
, et al.
·
Nature Communications
·
56
PDF
TorchDrug: A Powerful and Flexible Machine Learning Platform for Drug Discovery
2022
·
Zhu, Zhaocheng
, Shi, Chence
, et al.
·
arXiv (Cornell University)
·
31
PDF
Neural-Symbolic Models for Logical Queries on Knowledge Graphs
2022
·
Zhu, Zhaocheng
, Galkin, Mikhail
, et al.
·
arXiv (Cornell University)
·
28
PDF
Bering: joint cell segmentation and annotation for spatial transcriptomics with transferred graph embeddings
2025
·
Kang Jin
, Zuobai Zhang
, et al.
·
Nature Communications
·
25
PDF
A Systematic Study of Joint Representation Learning on Protein Sequences and Structures
2023
·
Zhang, Zuobai
, Wang, Chuanrui
, et al.
·
arXiv (Cornell University)
·
25
PDF
Power-Law Graphs Have Minimal Scaling of Kemeny Constant for Random Walks
2020
·
Wanyue Xu
, Yibin Sheng
, et al.
·
International World Wide Web Conference (WWW)
·
19
DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing
2023
·
Yangtian Zhang
, Zuobai Zhang
, et al.
·
neural information processing systems
·
15
PDF
Minimizing Spectral Radius of Non-Backtracking Matrix by Edge Removal
2021
·
Zuobai Zhang
, Zhongzhi Zhang
, et al.
·
ACM International Conference on Information and Knowledge Management (CIKM)
·
15
Pre-Training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction
2023
·
Zuobai Zhang
, Minghao Xu
, et al.
·
neural information processing systems
·
12
PDF
Structured Multi-task Learning for Molecular Property Prediction
2022
·
Liu, Shengchao
, Qu, Meng
, et al.
·
arXiv (Cornell University)
·
12
PDF
Biharmonic Distance-Based Performance Metric for Second-Order Noisy Consensus Networks
2021
·
Yuhao Yi
, Bingjia Yang
, et al.
·
IEEE Transactions on Information Theory
·
12
Opinion dynamics in social networks incorporating higher-order interactions
2024
·
Zuobai Zhang
, Wanyue Xu
, et al.
·
Data Mining and Knowledge Discovery
·
11
Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling
2023
·
Lu, Jiarui
, Zhong, Bozitao
, et al.
·
arXiv (Cornell University)
·
11
PDF
Publisher Correction: Learning interpretable cellular and gene signature embeddings from single-cell transcriptomic data
2021
·
Yifan Zhao
, Huiyu Cai
, et al.
·
Nature Communications
·
10
PDF
Fast Approximation of Coherence for Second-Order Noisy Consensus Networks
2020
·
Zuobai Zhang
, Wanyue Xu
, et al.
·
IEEE Transactions on Cybernetics
·
10
Structure-Informed Protein Language Model
2024
·
Zhang, Zuobai
, Lu, Jiarui
, et al.
·
arXiv (Cornell University)
·
9
PDF
Coherence Scaling of Noisy Second-Order Scale-Free Consensus Networks
2021
·
Wanyue Xu
, Bin Wu
, et al.
·
IEEE Transactions on Cybernetics
·
9
PDF
Nearly Linear Time Algorithm for Mean Hitting Times of Random Walks on a Graph
2020
·
Zuobai Zhang
, Wanyue Xu
, et al.
·
ACM International Conference on Web Search and Data Mining (WSDM)
·
9
Effects of Stubbornness on Opinion Dynamics
2022
·
Wanyue Xu
, Liwang Zhu
, et al.
·
ACM International Conference on Information and Knowledge Management (CIKM)
·
8
PDF
Opinion Dynamics Incorporating Higher-Order Interactions
2020
·
Zuobai Zhang
, Wanyue Xu
, et al.
·
Proceedings
·
8
PDF
Multi-Scale Representation Learning for Protein Fitness Prediction
2024
·
Zuobai Zhang
, Pascal Notin
, et al.
·
neural information processing systems
·
7
PDF
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Works count:
54
Citation count:
788
H-index:
12
I10-index:
19
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