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Umberto Perron

Observed names: Perron, Umberto, U. Perron
Institution: Human Technopole
ORCID: 0000-0001-8003-6545
Observed ORCID: 0000-0001-8003-6545
OpenAlex ID: A5090904309
Sampling bias and model choice in continuous phylogeography: Getting lost on a random walk
2021 · Antanas Kalkauskas, Umberto Perron, et al. · PLoS Computational Biology · 70
In silico prediction of lncRNA function using tissue specific and evolutionary conserved expression
2017 · Umberto Perron, Paolo Provero, et al. · BMC Bioinformatics · 53
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CoRe: a robustly benchmarked R package for identifying core-fitness genes in genome-wide pooled CRISPR-Cas9 screens
2021 · Alessandro Vinceti, Emre Karakoc, et al. · BMC Genomics · 27
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Modeling Structural Constraints on Protein Evolution via Side-Chain Conformational States
2019 · Umberto Perron, Alexey M Kozlov, et al. · Molecular Biology and Evolution · 18
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Integrative ensemble modelling of cetuximab sensitivity in colorectal cancer patient-derived xenografts
2024 · Umberto Perron, Elena Grassi, et al. · Nature Communications · 17
An interactive web application for processing, correcting, and visualizing genome-wide pooled CRISPR-Cas9 screens
2023 · Alessandro Vinceti, Riccardo Roberto De Lucia, et al. · Cell Reports Methods · 12
Reduced gene templates for supervised analysis of scale-limited CRISPR-Cas9 fitness screens
2022 · Alessandro Vinceti, Umberto Perron, et al. · Cell Reports · 6
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A heuristic algorithm solving the mutual-exclusivity-sorting problem
2023 · Alessandro Vinceti, Lucia Trastulla, et al. · Bioinformatics · 5
Ambiguity Coding Allows Accurate Inference of Evolutionary Parameters from Alignments in an Aggregated State-Space
2020 · Claudia C Weber, Umberto Perron, et al. · Systematic Biology · 5
Probabilistic Models for the Study of Protein Evolution
2019 · Umberto Perron, Iain H. Moal, et al. · Wiley eBooks · 5
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CoRe: A robustly benchmarked R package for identifying core-fitness genes in genome-wide pooled CRISPR-Cas9 screens
2021 · Alessandro Vinceti, Emre Karakoc, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 4
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Redefining false discoveries in cancer data analyses
2021 · Hanna Najgebauer, Umberto Perron, et al. · Nature Computational Science · 2
Beyond External Load: Integrative Immune Monitoring Reveals Injury-Predictive Signals in the Athlete’s Internal State
2026 · Umberto Perron, Ana Mendizabal-Sasieta, et al. · medRxiv
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CRISPR-enhanced assessment of variants of unknown significance nominates oncology therapeutic targets and drug repositioning opportunities
2026 · Aurora Savino, Athanasios Oikonomou, et al. · bioRxiv (Cold Spring Harbor Laboratory)
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Longitudinal Immune Monitoring Quantifies Disease Trajectory and Treatment Response in Graves' Orbitopathy
2026 · Ana Mendizabal-Sasieta, Laura Jiménez-Gracia, et al. · SSRN Electronic Journal
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14P Integrated modelling of T cell repertoires to identify clonotype signatures of ICI response
2023 · J.L. Melero, B. Colom-Sanmartí, et al. · Immuno-Oncology Technology
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CeSta_makeInput_data
2023 · Perron, Umberto · Figshare
CeSta_makeFeatures_input
2022 · Perron, Umberto · Zenodo (CERN European Organization for Nuclear Research)
CRISPRcleanR WebApp: An Interactive Web Application for Processing Genome-Wide Pooled CRISPR-Cas9 Viability Screen
2022 · Alessandro Vinceti, Riccardo Roberto De Lucia, et al. · SSRN Electronic Journal
Additional file 1 of CoRe: a robustly benchmarked R package for identifying core-fitness genes in genome-wide pooled CRISPR-Cas9 screens
2021 · Vinceti, Alessandro, Karakoc, Emre, et al. · Figshare
Additional file 8 of CoRe: a robustly benchmarked R package for identifying core-fitness genes in genome-wide pooled CRISPR-Cas9 screens
2021 · Vinceti, Alessandro, Karakoc, Emre, et al. · Figshare
Additional file 3 of CoRe: a robustly benchmarked R package for identifying core-fitness genes in genome-wide pooled CRISPR-Cas9 screens
2021 · Vinceti, Alessandro, Karakoc, Emre, et al. · Figshare
Additional file 9 of CoRe: a robustly benchmarked R package for identifying core-fitness genes in genome-wide pooled CRISPR-Cas9 screens
2021 · Vinceti, Alessandro, Karakoc, Emre, et al. · Figshare
RAM55 annotated dataset
2020 · Perron, Umberto · Zenodo (CERN European Organization for Nuclear Research)
The Influence of Structural Constraints on Protein Evolution
2020 · Perron, Umberto · Apollo (University of Cambridge)
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Works count: 37
Citation count: 225
H-index: 6
I10-index: 6
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