Author

Qingyi Mao

Observed name: Mao, Qingyi

Institution: Zhejiang University of Technology

Observed institutions: Macao Polytechnic University, Zhejiang University of Technology

ORCID: 0009-0009-8548-1221

Observed ORCID: 0009-0009-8548-1221

OpenAlex ID: A5101349273

PepExplainer: An explainable deep learning model for selection-based macrocyclic peptide bioactivity prediction and optimization

2024 · Silong Zhai, Yahong Tan, et al. · European Journal of Medicinal Chemistry · 17

Accurate structure prediction of cyclic peptides containing unnatural amino acids using HighFold3

2025 · Sen Cao, Cheng Zhu, et al. · Briefings in Bioinformatics · 16

NCPepFold: Accurate Prediction of Noncanonical Cyclic Peptide Structures via Cyclization Optimization with Multigranular Representation

2025 · Qingyi Mao, Tianfeng Shang, et al. · Journal of Chemical Theory and Computation · 14

AlphaFold3 for Noncanonical Cyclic Peptide Modeling: Hierarchical Benchmarking Reveals Accuracy and Practical Guidelines

2025 · Chengyun Zhang, Wentong Wang, et al. · Journal of Chemical Information and Modeling · 13

HighMPNN: A Graph Neural Network Approach for Structure-Constrained Cyclic Peptide Sequence Design

2025 · Wen Xu, Chengyun Zhang, et al. · IEEE Journal of Biomedical and Health Informatics · 11

An artificial intelligence-driven synthesis planning platform (PhotoCat) for photocatalysis

2026 · Jiangcheng Xu, Silong Zhai, et al. · Communications Chemistry · 6

HighFold-MeD: a Rosetta distillation model to accelerate structure prediction of cyclic peptides with backbone N-methylation and d-amino acids

2025 · Zhigang Cao, Tianfeng Shang, et al. · Journal of Cheminformatics · 3

High-PepBinder: A pLM-Guided Latent Diffusion Framework for Affinity-Aware Target-Specific Peptide Design

2026 · Qingyi Mao, Silong Zhai, et al. · Journal of Chemical Information and Modeling · 2

HighRelax: Physics-Based Refinement of Deep Learning Protein Predictions with Noncanonical Amino Acids

2026 · Sen Cao, Chengyun Zhang, et al. · Journal of Chemical Theory and Computation · 2

Abstract 4376: Harnessing artificial intelligence to optimize neoantigen prediction and mRNA design for personalized cancer vaccine

2026 · Yang Liu, Qingyi Mao, et al. · Cancer Research · 1

High-PepBinder: A pLM-Guided Latent Diffusion Framework with Consistency-Driven Joint Optimization for Target-Specific Peptide Design

2026 · Mao, Qingyi, Zhai, Silong · Zenodo (CERN European Organization for Nuclear Research)

Works count: 11

Citation count: 85

H-index: 6

I10-index: 5