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Aditya Upadhyay

Comparative Genome Analysis Across 128 Phytophthora Isolates Reveal Species-Specific Microsatellite Distribution and Localized Evolution of Compartmentalized Genomes
2022 · Kajal Mandal, Subhajeet Dutta, et al. · Frontiers in Microbiology · 19
Genetic Evidence of Yersinia pestis from the First Pandemic
2025 · Swamy Adapa, Karen Hendrix, et al. · Genes · 8
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Comparative genomics of endophytic fungi Apiospora malaysiana with related ascomycetes indicates adaptation attuned to lifestyle choices with potential sustainable cellulolytic activity
2025 · Shashi Kant, Sreyashi Das, et al. · DNA Research · 6
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Ancient Origins and Global Diversity of Plague: Genomic Evidence for Deep Eurasian Reservoirs and Recurrent Emergence
2025 · Subhajeet Dutta, Aditya Upadhyay, et al. · Pathogens · 1
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Data for the manuscript "Few structural errors in RefSeq genome annotations: a survey of 30 eukaryotes", submitted to Database.
2026 · Upadhyay, Aditya, Tripathy, Sucheta · Zenodo (CERN European Organization for Nuclear Research)
CyanoCIN v1.1 : Curated Database of Cyanobacterial RiPP Precursor Peptides
2026 · Dutta, Subhajeet, Upadhyay, Aditya, et al. · Zenodo (CERN European Organization for Nuclear Research)
Three-dimensional genome architecture of the pathogenic oomycete Phytophthora capsici provides insights into its chromatin architecture and regulatory complexity
2026 · Kajal Mandal, Mathu Malar C, et al. · Communications Biology
Fungal cellulase training corpus and anchor-guided generated candidates
2026 · Upadhyay, Aditya · Zenodo (CERN European Organization for Nuclear Research)
CVAE training data and generated peptide/enzyme candidates for AMP-CPP hybrid peptide design
2026 · Aditya Upadhyay · Zenodo (CERN European Organization for Nuclear Research)
Three-Dimensional Genome Architecture of Pathogenic Oomycete Provides Insights into Chromatin Architecture and Regulatory Complexity
2026 · Sucheta Tripathy, Kajal Mandal, et al. · Research Square
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galEuPy: An integrated data management and visualization system for annotated genomes
2025 · Aditya Upadhyay, Arijit Panda, et al. · Research Square
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Comparative genome analysis of Phytophthora melonis MCC 9865 WB isolated from Eastern India with other isolates reveal host mediated adaptation
2025 · Subhajeet Dutta, Kajal Mandal, et al. · The Nucleus
Galeupy: An Integrated Data Management and Visualization System for Annotated Genomes
2025 · Aditya Upadhyay, Arijit Panda, et al. · SSRN Electronic Journal
Unraveling the first world pandemic in an ancient cosmopolitan city with archaeological and genetic evidence
2024 · Rays Jiang, Swamy Rakesh Adapa, et al. · Research Square
Unraveling the first world pandemic in an ancient cosmopolitan city with archaeological and genetic evidence
2024 · Rays Jiang, Swamy Rakesh Adapa, et al. · Research Square
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Works count: 15
Citation count: 34
H-index: 3
I10-index: 1
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