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Vicky Chen

Mannose receptor (CD206) activation in tumor-associated macrophages enhances adaptive and innate antitumor immune responses
2020 · Jesse M. Jaynes, Rushikesh Sable, et al. · Science Translational Medicine · 413
A multicenter study benchmarking single-cell RNA sequencing technologies using reference samples
2020 · Wanqiu Chen, Yongmei Zhao, et al. · Nature Biotechnology · 112
Learning a hierarchical representation of the yeast transcriptomic machinery using an autoencoder model
2016 · Lujia Chen, Chunhui Cai, et al. · BMC Bioinformatics · 98
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Urine Single-Cell RNA Sequencing in Focal Segmental Glomerulosclerosis Reveals Inflammatory Signatures
2021 · Khun Zaw Latt, Jurgen Heymann, et al. · Kidney International Reports · 65
Systematic discovery of the functional impact of somatic genome alterations in individual tumors through tumor-specific causal inference
2019 · Chunhui Cai, Gregory F. Cooper, et al. · PLoS Computational Biology · 36
Integrating data and knowledge to identify functional modules of genes: a multilayer approach
2019 · Lifan Liang, Vicky Chen, et al. · BMC Bioinformatics · 35
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Saccharomyces as a vaccine against systemic aspergillosis: ‘the friend of man’ a friend again?
2011 · Min Liu, Javier Capilla, et al. · Journal of Medical Microbiology · 32
Trans-species learning of cellular signaling systems with bimodal deep belief networks
2015 · Lujia Chen, Chunhui Cai, et al. · Bioinformatics · 31
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Tracking B cell responses to the SARS-CoV-2 mRNA-1273 vaccine
2023 · Felipe Lopes de Assis, Kenneth B. Hoehn, et al. · Cell Reports · 27
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T Cell–Mediated Antitumor Immunity Cooperatively Induced By TGFβR1 Antagonism and Gemcitabine Counteracts Reformation of the Stromal Barrier in Pancreatic Cancer
2021 · Dandan Li, Nicholas Schaub, et al. · Molecular Cancer Therapeutics · 19
Killed Saccharomyces cerevisiae Protects Against Lethal Challenge of Cryptococcus grubii
2014 · Tanya Majumder, Min Liu, et al. · Mycopathologia · 16
Experimental Evidence That Granulocyte Transfusions Are Efficacious in Treatment of Neutropenic Hosts with Pulmonary Aspergillosis
2013 · Marife Martinez, Vicky Chen, et al. · Antimicrobial Agents and Chemotherapy · 14
Association of oxidized ApoB and oxidized ApoA-I with high-risk coronary plaque features in cardiovascular disease
2023 · Alexander V. Sorokin, Christin G. Hong, et al. · JCI Insight · 12
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Post-transplant G-CSF impedes engraftment of gene-edited human hematopoietic stem cells by exacerbating p53-mediated DNA damage response
2024 · Daisuke Araki, Vicky Chen, et al. · Cell stem cell · 8
A signal-based method for finding driver modules of breast cancer metastasis to the lung
2017 · Gaibo Yan, Vicky Chen, et al. · Scientific Reports · 7
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Conceptualization of molecular findings by mining gene annotations
2013 · Vicky Chen, Xinghua Lu · BMC Proceedings · 7
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Signal-Oriented Pathway Analyses Reveal a Signaling Complex as a Synthetic Lethal Target for p53 Mutations
2016 · Songjian Lu, Chunhui Cai, et al. · Cancer Research · 5
The transcription factors Tfeb and Tfe3 are required for survival and embryonic development of pancreas and liver in zebrafish
2025 · Alberto Rissone, Martina La Spina, et al. · PLoS Genetics · 4
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Revealing common disease mechanisms shared by tumors of different tissues of origin through semantic representation of genomic alterations and topic modeling
2017 · Vicky Chen, John Paisley, et al. · BMC Genomics · 3
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Mapping annotations with textual evidence using an scLDA model.
2011 · Bo Jin, Vicky Chen, et al. · PubMed · 2
Novel therapeutics for SF3B1 mutant cancers which exploit the missplicing of DCAF16
2025 · Michal Sekrecki, Agata Sekrecka, et al. · Blood · 1
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Large-scale tethered screen of RNA-binding proteins reveals novel regulators of poly(A) site selection
2026 · Pratibha Jagannatha, Yoseop Yoon, et al. · Molecular Cell
Data from Signal-Oriented Pathway Analyses Reveal a Signaling Complex as a Synthetic Lethal Target for p53 Mutations
2023 · Songjian Lu, Chunhui Cai, et al.
Table S5 from Signal-Oriented Pathway Analyses Reveal a Signaling Complex as a Synthetic Lethal Target for p53 Mutations
2023 · Songjian Lu, Chunhui Cai, et al.
Supplementary Figures, Results, and Methods from Signal-Oriented Pathway Analyses Reveal a Signaling Complex as a Synthetic Lethal Target for p53 Mutations
2023 · Songjian Lu, Chunhui Cai, et al.
Works count: 40
Citation count: 947
H-index: 12
I10-index: 13
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