Author

John Wagner

Observed names: John M. Wagner, Wagner, John

Institution: IBM Research - Australia

Observed institutions: Yeditepe University, IBM (United States), James Hutton Institute, The University of Melbourne, Melbourne Bioinformatics, Institute for Advanced Study, Psychogenics (United States), IBM Research - Thomas J. Watson Research Center, IBM Research - Australia, Biomathematics and Statistics Scotland, Rutgers Cancer Institute, University of Medicine and Dentistry of New Jersey, University of Virginia, The University of Adelaide, UConn Health, University of California, Davis

OpenAlex ID: A5106447615

Computational Cell Biology

2004 · Fall, Christopher, Marland, Eric, et al. · Springer eBooks · 406

A plausible model for the digital response of p53 to DNA damage

2005 · Lan Ma, John Wagner, et al. · Proceedings of the National Academy of Sciences · 356

A Single Nucleotide Polymorphism in the MDM2 Gene Disrupts the Oscillation of p53 and MDM2 Levels in Cells

2007 · Wenwei Hu, Zhaohui Feng, et al. · Cancer Research · 112

A wave of IP3 production accompanies the fertilization Ca2+ wave in the egg of the frog, Xenopus laevis: theoretical and experimental support

2003 · John Wagner, Christopher P Fall, et al. · Cell Calcium · 100

Unique Aspects of the Structure and Dynamics of Elementary Iβ Cellulose Microfibrils Revealed by Computational Simulations

2015 · Daniel P. Oehme, Matthew T. Downton, et al. · PLANT PHYSIOLOGY · 96

Gaining insight into cell wall cellulose macrofibril organisation by simulating microfibril adsorption

2015 · Daniel P. Oehme, Monika S. Doblin, et al. · Cellulose · 66

Evolutionary Dynamics of the Cellulose Synthase Gene Superfamily in Grasses

2015 · Julian G. Schwerdt, Katrin MacKenzie, et al. · PLANT PHYSIOLOGY · 58

Dimerization of Bacterial Diaminopimelate Epimerase Is Essential for Catalysis

2013 · Lilian Hor, Renwick C.J. Dobson, et al. · Journal of Biological Chemistry · 52

Ordered cyclic motifs contribute to dynamic stability in biological and engineered networks

2008 · Avi Ma'ayan, Guillermo A. Cecchi, et al. · Proceedings of the National Academy of Sciences · 51

An Ultrascalable Solution to Large-scale Neural Tissue Simulation

2011 · James Kozloski, John Wagner · Frontiers in Neuroinformatics · 50

Analysis of nonlinear dynamics on arbitrary geometries with the Virtual Cell

2001 · James C. Schaff, Boris M. Slepchenko, et al. · Chaos An Interdisciplinary Journal of Nonlinear Science · 44

Characterization of the Lipid-Binding Site of Equinatoxin II by NMR and Molecular Dynamics Simulation

2015 · Daniel K. Weber, Shenggen Yao, et al. · Biophysical Journal · 43

Internet of Blockchains: Techniques and Challenges Ahead

2018 · Hoang Tam Vo, Ziyuan Wang, et al. · IEEE International Conference on Internet of Things (iThings) and IEEE Green Computing and Communications (GreenCom) and IEEE Cyber, Physical and Social Computing (CPSCom) and IEEE Smart Data (SmartData) · 42

Crystal, Solution and In silico Structural Studies of Dihydrodipicolinate Synthase from the Common Grapevine

2012 · Sarah C. Atkinson, Con Dogovski, et al. · PLoS ONE · 40

Enzymology of Bacterial Lysine Biosynthesis

2012 · Con Dogovski, Sarah. C., et al. · InTech eBooks · 37

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 3

2017 · Adam J. H. Newton, Alexandra H. Seidenstein, et al. · BMC Neuroscience · 36

Structural, kinetic and computational investigation of Vitis vinifera DHDPS reveals new insight into the mechanism of lysine-mediated allosteric inhibition

2013 · Sarah C. Atkinson, Con Dogovski, et al. · Plant Molecular Biology · 34

High performance computing enabling exhaustive analysis of higher order single nucleotide polymorphism interaction in Genome Wide Association Studies

2015 · Benjamin Goudey, Mani Abedini, et al. · Health Information Science and Systems · 33

Sensing of protein molecules through nanopores: a molecular dynamics study

2014 · Sridhar Kumar Kannam, Sung Cheol Kim, et al. · Nanotechnology · 28

Quaternary Structure Analyses of an Essential Oligomeric Enzyme

2015 · Tatiana P. Soares da Costa, Janni B. Christensen, et al. · Methods in enzymology on CD-ROM/Methods in enzymology · 25

On the amplification of molecular fluctuations for nonstationary systems: hydrodynamic fluctuations for the Lorenz model

1993 · Joel Keizer, Ronald F Fox, et al. · Physics Letters A · 25

Cortically restricted production of IP3 leads to propagation of the fertilization Ca2+ wave along the cell surface in a model of the Xenopus egg

2004 · Christopher P. Fall, John M. Wagner, et al. · Journal of Theoretical Biology · 24

Geometric dependence of the conductance drop in a nanopore due to a particle

2014 · Sung Cheol Kim, Sridhar Kumar Kannam, et al. · Physical Review E · 21

Mathematical model of TGF-βsignalling: feedback coupling is consistent with signal switching

2017 · Shabnam Khatibi, Hong-Jian Zhu, et al. · BMC Systems Biology · 20

Dynamic Modelling Reveals ‘Hotspots’ on the Pathway to Enzyme-Substrate Complex Formation

2016 · Shane E. Gordon, Daniel K. Weber, et al. · PLoS Computational Biology · 12

Works count: 38

Citation count: 1,841

H-index: 22

I10-index: 25