Author

Tekin Muhammed

Observed names: Muhammed Tekin, Muhammed, Tekin, TEKIN, MUHAMMED, Tekin, Muhammed

Institution: Yalova University

Observed institution: Yalova University

ORCID: 0000-0001-9843-0137

Observed ORCID: 0000-0001-9843-0137

OpenAlex ID: A5134478299

Pair-level signal in protein–protein interaction prediction from frozen language-model embeddings: code, notebooks, results and annotations

2026 · Tekin, Muhammed, Gök, Murat · Zenodo (CERN European Organization for Nuclear Research)

Code and reproduction artifact for "Reassessing Sequence-Based Cold-Start Protein–Protein Interaction Prediction: A Leakage-Controlled Benchmark, an Audit-Driven Reproducibility Study, and Calibrated Selective Prediction over Frozen PLM Embeddings"

2026 · TEKIN, MUHAMMED, Gök, Murat · Zenodo (CERN European Organization for Nuclear Research)

ppi_c3 v2: Code, Results, and Figures for "Reducing the Cold-Start Generalization Gap in Sequence-Based PPI Prediction"

2026 · Tekin, Muhammed, Gok, Murat · Zenodo (CERN European Organization for Nuclear Research)

Code and data for "Do hand-crafted physicochemical features complement protein language models for interaction prediction? A leakage-aware evaluation"

2026 · Muhammed, Tekin · Zenodo (CERN European Organization for Nuclear Research)

Cold-Start Protein–Protein Interaction Prediction Is Bounded by the Frozen Embedding, Not the Classifier: A Leakage-Controlled Audit and a Calibrated Conformal Baseline

2026 · Muhammed Tekin, Murat Gok · IEEE Access

GRACE: A Budget-Fair, Operator-Portable Framework Coupling Graph-Neural Warm-Starts with Metaheuristic Escape for QAOA Parameter Setting

2026 · Murat Gök, Sevdanur Genç, et al. · SSRN Electronic Journal

Works count: 7

Citation count: 2

H-index: 1

I10-index: