Year: 2010
Type: article
Abstract: SUMMARY: ViewDock TDW is a modification of the pre-existing ViewDock Chimera extension (http://www.cgl.ucsf.edu/chimera/) used to visualize results of virtual screening experiments. By combing TDW hardware and an enhanced ViewDock interface, dozens of ligand-protein complexes are rendered simultaneously to parallelize the analysis of candidate ligands. The ViewDock TDW GUI allows the user to easily and interactively manipulate the molecules on the TDW as an entire set, a selected subset or a single ligand-protein complex and preserves all Chimera functionality. AVAILABILITY AND IMPLEMENTATION: ViewDock TDW is an open source software; freely available on the web at http://www.tdw-prime.webs.com. Chimera UCSF is also available, free of charge, at http://www.cgl.ucsf.edu/chimera/
Source: Bioinformatics
Language: English
Subfield: Computational Theory and Mathematics
Field: Computer Science
Domain: Physical Sciences
Open Access status: bronze
Funders: National Science Foundation, Ministry of Education, Culture, Sports, Science and Technology, National Institutes of Health, University of California, San Francisco, National Heart, Lung, and Blood Institute, Office of International Science and Engineering, National Center for Research Resources
Awards: Pacific Rim Application and Grid Middleware Assembly, The Role of Phosphatases in EC Mechanotransduction, Resource for Biocomputing, Visualization, and Informatics, Pacific Rim Experiences for Undergraduates: Creating a Sustainable Model for International Undergraduate Research, Pacific Rim Application and Grid Middleware: Broadening PRAGMA Impact on Global Science and Technology Communities
OpenAlex ID: W2100635343