Work

The Stanford Microarray Database: data access and quality assessment tools

Year: 2003

Type: article

Abstract: The Stanford Microarray Database (SMD; http://genome-www.stanford.edu/microarray/) serves as a microarray research database for Stanford investigators and their collaborators. In addition, SMD functions as a resource for the entire scientific community, by making freely available all of its source code and providing full public access to data published by SMD users, along with many tools to explore and analyze those data. SMD currently provides public access to data from 3500 microarrays, including data from 85 publications, and this total is increasing rapidly. In this article, we describe some of SMD's newer tools for accessing public data, assessing data quality and for data analysis.

Source: Nucleic Acids Research

DOI: 10.1093/nar/gkg078

Authors: J. Gollub, Catherine A Ball, Gail Binkley, Janos Demeter, David B Finkelstein, Joan M Hebert, Tina Hernandez-Boussard, Heng Jin, Miroslava Kaloper, John C Matese, Mark Schroeder, Patrick O Brown, David Botstein, Gavin Sherlock

Institution: Stanford University

Language: English

Topic: Gene expression and cancer classification

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: green

OpenAlex ID: W2117190895

FWCI: 17.68

Cites: 14

Cited by: 324

Related to: 8