Work

VISTAL—a new 2D visualization tool of protein 3D structural alignments

Year: 2006

Type: article

Abstract: UNLABELLED: We offer a tool, denoted VISTAL, for two-dimensional visualization of protein structural alignments. VISTAL describes aligned structures as a series of matched secondary structure elements, colored according to the three-dimensional distance of their Calpha atoms. AVAILABILITY: VISTAL can be downloaded from http://trantor.bioc.columbia.edu/~kolodny/software.html.

Source: Bioinformatics

DOI: 10.1093/bioinformatics/btl353

Authors: Rachel Kolodny, Barry Honig

Institutions: Howard Hughes Medical Institute, Columbia University

Language: English

Topic: Protein Structure and Dynamics

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: bronze

Funders: National Institutes of Health, National Institute of General Medical Sciences

Awards: G4063576775, Structural Genomics of Eukaryotic Domain Families, G6652001077, G9000067001, G9000108615