Work

Current challenges in de novo plant genome sequencing and assembly

Year: 2012

Type: article

Abstract: Genome sequencing is now affordable, but assembling plant genomes de novo remains challenging. We assess the state of the art of assembly and review the best practices for the community.

Source: Genome biology

DOI: 10.1186/gb-2012-13-4-243

Authors: Michael C Schatz, Jan Witkowski, W Richard McCombie

Institution: Cold Spring Harbor Laboratory

Language: English

Topic: Genomics and Phylogenetic Studies

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: gold

Estimated APC paid: $5,490

Funders: National Science Foundation, U.S. Department of Energy, National Institutes of Health, National Human Genome Research Institute, Biological and Environmental Research

Awards: G102163711, Meeting on the Future of Plant Genome Sequencing and Analysis to be held May 18-20, 2011 at Cold Spring Harbor Laboratory, Cold Spring Harbor, NY., G1805209620, G262962599, G2857925935, G513797252, G5607048534, G6848031779, G6853236717, G9000184996, G90618688, G969889393

OpenAlex ID: W2154420975

FWCI: 7.203

Cites: 62

Cited by: 185

Related to: 10