Work

hPDI: a database of experimental human protein–DNA interactions

Year: 2009

Type: article

Abstract: UNLABELLED: The human protein DNA Interactome (hPDI) database holds experimental protein-DNA interaction data for humans identified by protein microarray assays. The unique characteristics of hPDI are that it contains consensus DNA-binding sequences not only for nearly 500 human transcription factors but also for >500 unconventional DNA-binding proteins, which are completely uncharacterized previously. Users can browse, search and download a subset or the entire data via a web interface. This database is freely accessible for any academic purposes. AVAILABILITY: http://bioinfo.wilmer.jhu.edu/PDI/.

Source: Bioinformatics

DOI: 10.1093/bioinformatics/btp631

Authors: Zhi Xie, Shaohui Hu, Seth Blackshaw, Heng Zhu, Jiang Qian

Institutions: Johns Hopkins University, Johns Hopkins Medicine

Language: English

Topic: Genomics and Chromatin Dynamics

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: hybrid

Estimated APC paid: $3,989

OpenAlex ID: W2159026625