The RCSB Protein Data Bank: a redesigned query system and relational database based on the mmCIF schema
Year: 2004
Type: article
Abstract: The Protein Data Bank (PDB) is the central worldwide repository for three-dimensional (3D) structure data of biological macromolecules. The Research Collaboratory for Structural Bioinformatics (RCSB) has completely redesigned its resource for the distribution and query of 3D structure data. The re-engineered site is currently in public beta test at http://pdbbeta.rcsb.org. The new site expands the functionality of the existing site by providing structure data in greater detail and uniformity, improved query and enhanced analysis tools. A new key feature is the integration and searchability of data from over 20 other sources covering genomic, proteomic and disease relationships. The current capabilities of the re-engineered site, which will become the RCSB production site at http://www.pdb.org in late 2005, are described.
Source: Nucleic Acids Research
DOI: 10.1093/nar/gki057
Authors: N. Deshpande, Kenneth J Addess, Wolfgang F Bluhm, Jeffrey C Merino-Ott, Wayne Townsend-Merino, Qing Zhang, Charlie Knezevich, Lie Xie, Li Chen, Zukang Feng, Rachel Kramer Green, Judith L Flippen-Anderson, John Westbrook, Helen M Berman, Philip E Bourne
Language: English
Subfield: Structural Biology
Domain: Life Sciences
Open Access status: hybrid
Estimated APC paid: $3,992
Funders: National Science Foundation, U.S. Department of Energy, Rutgers, The State University of New Jersey, San Diego Supercomputer Center, National Institute of Standards and Technology, Office of Science, University of California, San Diego, National Cancer Institute, National Institute of General Medical Sciences, National Institute of Neurological Disorders and Stroke, National Institute of Biomedical Imaging and Bioengineering, U.S. National Library of Medicine, National Center for Research Resources
OpenAlex ID: W2166458835