Work

FungiFun2: a comprehensive online resource for systematic analysis of gene lists from fungal species

Year: 2014

Type: article

Abstract: SUMMARY: Systematically extracting biological meaning from omics data is a major challenge in systems biology. Enrichment analysis is often used to identify characteristic patterns in candidate lists. FungiFun is a user-friendly Web tool for functional enrichment analysis of fungal genes and proteins. The novel tool FungiFun2 uses a completely revised data management system and thus allows enrichment analysis for 298 currently available fungal strains published in standard databases. FungiFun2 offers a modern Web interface and creates interactive tables, charts and figures, which users can directly manipulate to their needs. AVAILABILITY AND IMPLEMENTATION: FungiFun2, examples and tutorials are publicly available at https://elbe.hki-jena.de/fungifun/. CONTACT: [email protected] or [email protected].

Source: Bioinformatics

DOI: 10.1093/bioinformatics/btu627

Authors: Steffen Priebe, Christian Kreisel, Fabian Horn, Reinhard Guthke, Jörg Linde

Institution: Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. - Hans-Knöll-Institut (HKI)

Language: English

Topic: Bioinformatics and Genomic Networks

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: hybrid

Estimated APC paid: $3,989

Funder: Deutsche Forschungsgemeinschaft