Work

Single Cell Assay

Year: 2014

Type: software

Abstract: SingleCellAssay is an R package for organizing and managing data from single-cell biological assays including Fluidigm Biomark qPCR, Nanostring multiplexed single-cell hybridization, and RNASeq data. It implements the hurdle model for testing differential expression in single cell expression data, as well as visualization and infrastructure.

Source: Zenodo (CERN European Organization for Nuclear Research)

DOI: 10.5281/zenodo.9810

Authors: McDavid, Andrew, Finak, Greg, Gottardo, Raphael

Institution: Fred Hutch Cancer Center

Language: English

Topic: Single-cell and spatial transcriptomics

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: green

OpenAlex ID: W2263512434

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