Structural basis for olivetolic acid formation by a polyketide cyclase from Cannabis sativa
Year: 2016
Type: article
Abstract: In polyketide biosynthesis, ring formation is one of the key diversification steps. Olivetolic acid cyclase (OAC) from Cannabis sativa, involved in cannabinoid biosynthesis, is the only known plant polyketide cyclase. In addition, it is the only functionally characterized plant α+β barrel (DABB) protein that catalyzes the C2-C7 aldol cyclization of the linear pentyl tetra-β-ketide CoA as the substrate, to generate olivetolic acid (OA). Herein, we solved the OAC apo and OAC-OA complex binary crystal structures at 1.32 and 1.70 Å resolutions, respectively. The crystal structures revealed that the enzyme indeed belongs to the DABB superfamily, as previously proposed, and possesses a unique active-site cavity containing the pentyl-binding hydrophobic pocket and the polyketide binding site, which have never been observed among the functionally and structurally characterized bacterial polyketide cyclases. Furthermore, site-directed mutagenesis studies indicated that Tyr72 and His78 function as acid/base catalysts at the catalytic center. Structural and/or functional studies of OAC suggested that the enzyme lacks thioesterase and aromatase activities. These observations demonstrated that OAC employs unique catalytic machinery utilizing acid/base catalytic chemistry for the formation of the precursor of OA. The structural and functional insights obtained in this work thus provide the foundation for analyses of the plant polyketide cyclases that will be discovered in the future. DATA DEPOSITION: Structural data reported in this paper are available in the Protein Data Bank under the accession numbers 5B08 for the OAC apo, 5B09 for the OAC-OA binary complex and 5B0A, 5B0B, 5B0C, 5B0D, 5B0E, 5B0F and 5B0G for the OAC His5Q, Ile7F, Tyr27F, Tyr27W, Val59M, Tyr72F and His78S mutant enzymes, respectively.
Source: FEBS Journal
DOI: 10.1111/febs.13654
Authors: Xinmei Yang, Takashi Matsui, Takeshi Kodama, Takahiro Mori, Xiaoxi Zhou, Futoshi Taura, Hiroshi Noguchi, Ikuro Abe, Hiroyuki Morita
Language: English
Subfield: Molecular Biology
Domain: Life Sciences
Open Access status: bronze
Awards: Development of comprehensive calculation method of HLA-peptide affinity and application to elucidation of the pathogenesis of Behcet's disease, Susceptibility HLA alleles and the biological contribution of HLA for the pathogenesis of Behcet's disease or Scleroderma in East Asia, Unification of biosynthetic pathways of a variety of plant polyketides, Engineering of type III polyketide synthase by deletion and addition of residues, Engineering of plant-specific polyketide scaffold synthetic enzymes to produce structural diversity of compounds
OpenAlex ID: W2325675648
