Work

Reproducible RNA-seq analysis using recount2

Year: 2017

Type: article

Source: Nature Biotechnology

DOI: 10.1038/nbt.3838

Authors: Leonardo Collado-Torres, Abhinav Nellore, Kai Kammers, Shannon E Ellis, Margaret A Taub, Kasper D Hansen, Andrew E Jaffe, Ben Langmead, Jeffrey T Leek

Institutions: Johns Hopkins University, Lieber Institute for Brain Development, Oregon Health & Science University, Johns Hopkins Medicine, Sidney Kimmel Comprehensive Cancer Center

Language: English

Topic: Genomics and Phylogenetic Studies

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: green

Funders: National Science Foundation, Johns Hopkins University, National Institutes of Health, National Heart, Lung, and Blood Institute, National Institute of Mental Health, National Institute on Drug Abuse, National Cancer Institute, National Institute of General Medical Sciences

Awards: Methods for high-resolution analysis of genetic effects on gene expression, Identification and validation of cell specific eQTLs by Bayesian modeling, Using the Transcriptome for SNP and Gene Annotation, MODELING THE EFFECTS OF STRUCTURAL VARIATION IN GTEX DATA AND MENDELIAN DISEASE, Epigenetic Marks of Cocaine Addiction, G386607036, Genetic Regulation of Gene Expression and its Impact on Phenotypes, Systems approaches to link tissue-specific expression to disease, Harnessing GTEx to Create Transcriptome Knowledge and Inform Disease Biology, G4715193760, Epistatic and Cross Tissue Analysis for Human Gene Expression Traits, G5888954722, Statistical analysis of gene expression quantitative trait loci (eQTL), Methods for high-resolution analysis of genetic effects on gene expression, FACILITATING GTEx, DISEASE, AND GxE ANALYSES VIA FAST EXPRESSION (e)QTL MAPPING, Statistical analysis of gene expression quantitative trait loci (eQTL), CNS Mechanisms in Cocaine-Related Sudden Death, Characterizing the developing human brain transcriptome at single-base resolution, Statistical models for biological and technical variation in RNA sequencing

OpenAlex ID: W2606715885

FWCI: 14.03

Cites: 49

Cited by: 479

Related to: 9