Work

Chromatiblock: scalable whole-genome visualization of structural differences in prokaryotes

Year: 2020

Type: article

Abstract: Summary Chromatiblock is a Python application for visualizing the presence, absence and arrangement of syntenic blocks across large numbers of complete bacterial genomes. Availability Chromatiblock is freely available under a GPL license, for macOS, GNU/Linux and and Microsoft Windows from https://github.com/mjsull/chromatiblock/ Contact [email protected]

Source: The Journal of Open Source Software

DOI: 10.21105/joss.02451

Authors: Mitchell John Sullivan, Harm van Bakel

Institution: Icahn School of Medicine at Mount Sinai

Language: English

Topic: Genomics and Phylogenetic Studies

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: diamond

Funder: National Institute of Allergy and Infectious Diseases

Awards: G2868269852, Investigating genomic factors and microbiome features that impact CDI transmission and prognosis