Detecting abnormal connectivity in schizophrenia via a joint directed acyclic graph estimation model
Year: 2022
Type: article
Abstract: Functional connectivity (FC) between brain region has been widely studied and linked with cognition and behavior of an individual. FC is usually defined as the correlation or partial correlation of fMRI blood oxygen level-dependent (BOLD) signals between two brain regions. Although FC has been effective to understand brain organization, it cannot reveal the direction of interactions. Many directed acyclic graph (DAG) based methods have been applied to study the directed interactions but their performance was limited by the small sample size while high dimensionality of the available data. By enforcing group regularization and utilizing samples from both case and control groups, we propose a joint DAG model to estimate the directed FC. We first demonstrate that the proposed model is efficient and accurate through a series of simulation studies. We then apply it to the case-control study of schizophrenia (SZ) with data collected from the MIND Clinical Imaging Consortium (MCIC). We have successfully identified decreased functional integration, disrupted hub structures and characteristic edges (CtEs) in SZ patients. Those findings have been confirmed by previous studies with some identified to be potential markers for SZ patients. A comparison of the results between the directed FC and undirected FC showed substantial differences in the selected features. In addition, we used the identified features based on directed FC for the classification of SZ patients and achieved better accuracy than using undirected FC or raw features, demonstrating the advantage of using directed FC for brain network analysis.
Source: NeuroImage
Institutions: Tulane University, New York State Psychiatric Institute, Columbia University, The University of Sydney, University of Science and Technology of China, Mind Research Network, Boys Town National Research Hospital, Georgia Institute of Technology, Emory University, Georgia State University, Center for Translational Research in Neuroimaging and Data Science
Language: English
Subfield: Cognitive Neuroscience
Field: Neuroscience
Domain: Life Sciences
Open Access status: gold
Estimated APC paid: $3,450
Awards: Neurophysiological markers of HAND and the impact of aging: Evidence from MEG, Unified multivariate data-driven solutions for static and dynamic brain connectivity, Integration of fMRI imaging, genomics, network and biological knowledge, Integration of brain imaging and multi-omics data for improved diagnosis and prediction of mental disorders, G327412290, Integration of brain imaging with genomic and epigenomic data, G4084422711, RII Track-2 FEC: Developmental Chronnecto-Genomics (Dev-CoG): A Next Generation Framework for Quantifying Brain Dynamics and Related Genetic Factors in Childhood, Integration of multiscale genomic data for comprehensive analysis of complex dise, G527314314, DEVELOPMENTAL MULTIMODAL IMAGING OF NEUROCOGNITIVE DYNAMICS (DEV-MIND), Center for Pediatric Brain Health
OpenAlex ID: W3093498075
