On the potential for mapping apparent neural soma density via a clinically viable diffusion MRI protocol
Year: 2021
Type: article
Abstract: Diffusion MRI is a valuable tool for probing tissue microstructure in the brain noninvasively. Today, model-based techniques are widely available and used for white matter characterisation where their development is relatively mature. Conversely, tissue modelling in grey matter is more challenging, and no generally accepted models exist. With advances in measurement technology and modelling efforts, a clinically viable technique that reveals salient features of grey matter microstructure, such as the density of quasi-spherical cell bodies and quasi-cylindrical cell projections, is an exciting prospect. As a step towards capturing the microscopic architecture of grey matter in clinically feasible settings, this work uses a biophysical model that is designed to disentangle the diffusion signatures of spherical and cylindrical structures in the presence of orientation heterogeneity, and takes advantage of B-tensor encoding measurements, which provide additional sensitivity compared to standard single diffusion encoding sequences. For the fast and robust estimation of microstructural parameters, we leverage recent advances in machine learning and replace conventional fitting techniques with an artificial neural network that fits complex biophysical models within seconds. Our results demonstrate apparent markers of spherical and cylindrical geometries in healthy human subjects, and in particular an increased volume fraction of spherical compartments in grey matter compared to white matter. We evaluate the extent to which spherical and cylindrical geometries may be interpreted as correlates of neural soma and neural projections, respectively, and quantify parameter estimation errors in the presence of various departures from the modelling assumptions. While further work is necessary to translate the ideas presented in this work to the clinic, we suggest that biomarkers focussing on quasi-spherical cellular geometries may be valuable for the enhanced assessment of neurodevelopmental disorders and neurodegenerative diseases.
Source: NeuroImage
Institution: University College London
Language: English
Subfield: Radiology, Nuclear Medicine and Imaging
Field: Medicine
Domain: Health Sciences
Open Access status: gold
Estimated APC paid: $3,300
Funders: FP7 Coherent Development of Research Policies, National Institute for Health and Care Research, University College London, European Commission, Horizon 2020 Framework Programme, Engineering and Physical Sciences Research Council, Biotechnology and Biological Sciences Research Council, UCLH Biomedical Research Centre, NIHR Great Ormond Street Hospital Biomedical Research Centre
Awards: G100154322, G1147893575, G1397342677, G1433481316, G1831881799, G2161599022, G2272555850, G2786690806, G2810537366, A biophysical simulation framework for magnetic resonance microstructure imaging, G3018663809, G3067449776, Medical image computing for next-generation healthcare technology, G335601776, G3491140572, G3582126282, G3726127999, G4266322423, G4273785696, G4609667446, G4863649833, G495187929, G5130063062, London Interdisciplinary Doctoral Programme, A Clinical Decision Support system based on Quantitative multimodal brain MRI for personalized treatment in neurological and psychiatric disorders, G6070407908, Microscopic diffusion anisotropy imaging, G6595474451, G6659053483, G6728972159, G6963447889, G7098810573, G7152734509, G757612348, G8057189669, G8354936155, G8427053510, G844244329, G8797744537, G8974513733, G902693135
OpenAlex ID: W3174028649
